RNA–Protein interactions for RNA: ENST00000620465.4

MALAT1-216, metastasis associated lung adenocarcinoma transcript 1, humanhuman

TSL 2

Gene MALAT1, Length 333 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MALAT1-216ENST00000620465 IFIT2P09913 472 aaKnown RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 ATXN1LP0C7T5 689 aaKnown RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 CYP2C9P11712 490 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 XRCC6P12956 609 aaKnown RBP eCLIP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 ZKSCAN1P17029 563 aaPredicted RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 CHRM3P20309 590 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 ITGALP20701 1170 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 KLRC1P26715 233 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 PIK3CBP42338 1070 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 TM4SF4P48230 202 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 TOB1P50616 345 aaPredicted RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 NEK3P51956 506 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 VAV2P52735 878 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 DGCR2P98153 550 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SATB1Q01826 763 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 GUCY1B3Q02153 619 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 CTBP1Q13363 440 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 DYRK1AQ13627 763 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 HLXQ14774 488 aaPredicted RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 IQCB1Q15051 598 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 LONRF1Q17RB8 773 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 LSM12Q3MHD2 195 aaKnown RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 C3orf38Q5JPI3 329 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SYCP2LQ5T4T6 812 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 KCNV1Q6PIU1 500 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 LAYNQ6UX15 382 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SLC30A10Q6XR72 485 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 RHOUQ7L0Q8 258 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SESTD1Q86VW0 696 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 ADGRG5Q8IZF4 528 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SLC15A4Q8N697 577 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SNX19Q92543 992 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 ZC3H10Q96K80 434 aaKnown RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SLC46A1Q96NT5 459 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 STRBPQ96SI9 672 aaKnown RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 NAA15Q9BXJ9 866 aaKnown RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 ZNF341Q9BYN7 854 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 KRTAP9-9Q9BYP9 154 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 KRTAP9-4Q9BYQ2 154 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 TTYH3Q9C0H2 523 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 VPS11Q9H270 941 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 A1CFQ9NQ94 594 aaKnown RBP4.32□□□□□ -1.72
MALAT1-216ENST00000620465 GPRC5BQ9NZH0 403 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 COL20A1Q9P218 1284 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 PHTF1Q9UMS5 762 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 MYRFQ9Y2G1 1151 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 RAD54BQ9Y620 910 aa4.32□□□□□ -1.72
MALAT1-216ENST00000620465 SPATA31A3Q5VYP0 1347 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 TRGV11A0A075B6L2 103 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 CENPVL1A0A0U1RR11 272 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 UNC119BA6NIH7 251 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 PYCARD-AS1I3L0S3 204 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 KPNA5O15131 536 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 SPDEFO95238 335 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 IL18RAPO95256 599 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 BUD31P41223 144 aaPredicted RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 NPTX2P47972 431 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 GCLCP48506 637 aaPredicted RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 PRIM2P49643 509 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 CASP5P51878 434 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 AK2P54819 239 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 LOXL3P58215 753 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 KRTAP10-2P60368 255 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 RPS16P62249 146 aaKnown RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 FPGSQ05932 587 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 DAG1Q14118 895 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 BRD3Q15059 726 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 DCAF12L1Q5VU92 463 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 SP5Q6BEB4 398 aaPredicted RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 MICALCLQ6ZW33 695 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 TMPRSS9Q7Z410 1059 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 MICU3Q86XE3 530 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 ARHGEF19Q8IW93 802 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 OR56A3Q8NH54 315 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 PROKR1Q8TCW9 393 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 FUBP1Q96AE4 644 aaKnown RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 NACC2Q96BF6 587 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 LRIG1Q96JA1 1093 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 TBCBQ99426 244 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 MS4A7Q9GZW8 240 aaPredicted RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 SMOC2Q9H3U7 446 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 UNKLQ9H9P5 680 aaKnown RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 SLC2A4RGQ9NR83 387 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 CHST12Q9NRB3 414 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 INTS13Q9NVM9 706 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 DKK2Q9UBU2 259 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 SHOC2Q9UQ13 582 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 ZBTB32Q9Y2Y4 487 aaPredicted RBP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 UTP18Q9Y5J1 556 aaKnown RBP eCLIP4.31□□□□□ -1.72
MALAT1-216ENST00000620465 HS3ST4Q9Y661 456 aa4.31□□□□□ -1.72
MALAT1-216ENST00000620465 A0A0B4J269 797 aa4.3□□□□□ -1.72
MALAT1-216ENST00000620465 TMEM233B4DJY2 109 aa4.3□□□□□ -1.72
MALAT1-216ENST00000620465 DCLK1O15075 740 aa4.3□□□□□ -1.72
MALAT1-216ENST00000620465 MATN3O15232 486 aa4.3□□□□□ -1.72
MALAT1-216ENST00000620465 LPXNO60711 386 aa4.3□□□□□ -1.72
MALAT1-216ENST00000620465 ZNF202O95125 648 aa4.3□□□□□ -1.72
MALAT1-216ENST00000620465 PARP1P09874 1014 aaKnown RBP4.3□□□□□ -1.72
MALAT1-216ENST00000620465 MAKP20794 623 aa4.3□□□□□ -1.72
MALAT1-216ENST00000620465 PXNP49023 591 aaPredicted RBP4.3□□□□□ -1.72
MALAT1-216ENST00000620465 NDUFV1P49821 464 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms