RNA–Protein interactions for RNA: ENST00000617647.4

PDE6A-205, Transcript of phosphodiesterase 6A, humanhuman

TSL 1 (best) BASIC

Gene PDE6A, Length 4,039 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6A-205ENST00000617647 RNF26Q9BY78 433 aaPredicted RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 HESX1Q9UBX0 185 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 STK17AQ9UEE5 414 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 HEMK1Q9Y5R4 338 aaPredicted RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 MYH10P35580 1976 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 SPATA31D1Q6ZQQ2 1576 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 CEMIPQ8WUJ3 1361 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 FLT1P17948 1338 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 NCKAP5LQ9HCH0 1330 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 AKAP12Q02952 1782 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 MIF4GDA9UHW6 222 aaKnown RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 TNFRSF10AO00220 468 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 KCNQ3O43525 872 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 FARP2O94887 1054 aaPredicted RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 TRIM16O95361 564 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 CRYZL1O95825 349 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 ACTN1P12814 892 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 ITIH2P19823 946 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 ECHS1P30084 290 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 MAN1A1P33908 653 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 ST13P50502 369 aaKnown RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 SLC25A3Q00325 362 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 CAV1Q03135 178 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 TIGD2Q4W5G0 525 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 C4orf22Q6V702 233 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 AKAP14Q86UN6 197 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 EFCAB3Q8N7B9 438 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 IL17REQ8NFR9 667 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 HELBQ8NG08 1087 aaPredicted RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 RFFLQ8WZ73 363 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 AZIN2Q96A70 460 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 DCUN1D1Q96GG9 259 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 NAGPAQ9UK23 515 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 DENND2AQ9ULE3 1009 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 PCDHB13Q9Y5F0 798 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 C2orf71A6NGG8 1288 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 CHRNB1P11230 501 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 PRKACAP17612 351 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 COILP38432 576 aaPredicted RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 XIAPP98170 497 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 GCKRQ14397 625 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 PDK4Q16654 411 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 C6orf52Q5T4I8 152 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 TWF2Q6IBS0 349 aaKnown RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 SNRNP48Q6IEG0 339 aaKnown RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 MFSD5Q6N075 450 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 NEK5Q6P3R8 708 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 Q6ZNX1 250 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 CYFIP1Q7L576 1253 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 PDSS2Q86YH6 399 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 TCAIMQ8N3R3 496 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 RBM15BQ8NDT2 890 aaKnown RBP7.73□□□□□ -1.17
PDE6A-205ENST00000617647 KCNK16Q96T55 309 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 MIPEPQ99797 713 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 SLX1AQ9BQ83 275 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 BEGAINQ9BUH8 593 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 CCSER2Q9H7U1 834 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 ARMT1Q9H993 441 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 LY9Q9HBG7 655 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 OSGEPQ9NPF4 335 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 COPRSQ9NQ92 184 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 SOX13Q9UN79 622 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 USTQ9Y2C2 406 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 STK24Q9Y6E0 443 aa7.73□□□□□ -1.17
PDE6A-205ENST00000617647 ARPC4-TTLL3A0A0A6YYG9 625 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 LINC00854A0A1B0GVQ3 168 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 KANSL1LA0AUZ9 987 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 GOLGA8SH3BPF8 625 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 GOLGA8MH3BSY2 632 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PSMD12O00232 456 aaPredicted RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 COPEO14579 308 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ARHGEF9O43307 516 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ZC3H11AO75152 810 aaKnown RBP eCLIP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ATF4P18848 351 aaPredicted RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ADRA1DP25100 572 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 COPAP53621 1224 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 KLRC3Q07444 240 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PKN1Q16512 942 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PKN2Q16513 984 aaKnown RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ATG14Q6ZNE5 492 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 DACH2Q96NX9 599 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 VAT1LQ9HCJ6 419 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 A8MU76 341 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 KLRF2D3W0D1 207 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CALM1P0DP23 149 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CALM2P0DP24 149 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CALM3P0DP25 149 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 HOXD13P35453 343 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 MAGEA4P43358 317 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 CSE1LP55060 971 aaKnown RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 ARL4CP56559 192 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 EIF4A1P60842 406 aaKnown RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 COPZ1P61923 177 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 FLOT2Q14254 428 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 TRIM25Q14258 630 aaKnown RBP7.72□□□□□ -1.17
PDE6A-205ENST00000617647 NRF1Q16656 503 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 FAM26FQ5R3K3 315 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 LDLRAP1Q5SW96 308 aa7.72□□□□□ -1.17
PDE6A-205ENST00000617647 PDXDC2PQ6P474 469 aa7.72□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms