RNA–Protein interactions for RNA: ENST00000616114.4

PCDH15-229, Transcript of protocadherin related 15, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH15, Length 5,846 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-229ENST00000616114 CTCFP49711 727 aaPredicted RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 GPR162Q16538 588 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 EFCAB12Q6NXP0 572 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 ARHGEF19Q8IW93 802 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 MCUQ8NE86 351 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 OLFM3Q96PB7 478 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 SHOC2Q9UQ13 582 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 PPP2R3BQ9Y5P8 575 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 SNX9Q9Y5X1 595 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 RGPD8O14715 1765 aaPredicted RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 RCCD1A6NED2 376 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 IGF2BP3O00425 579 aaKnown RBP eCLIP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 TCF7P36402 384 aaPredicted RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 GMPSP49915 693 aaPredicted RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 SPOUT1Q5T280 376 aaKnown RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 MTBPQ96DY7 904 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 HPDLQ96IR7 371 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 NSL1Q96IY1 281 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 HSD3B7Q9H2F3 369 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 MAGED2Q9UNF1 606 aaPredicted RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 ASTN1O14525 1302 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 A0A0U1RQJ8 604 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 RRN3P2A6NIE6 340 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 LCP1P13796 627 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 NQO1P15559 274 aaKnown RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 SLC15A2Q16348 729 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 KRT80Q6KB66 452 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 APLFQ8IW19 511 aaPredicted RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 TSEN2Q8NCE0 465 aaKnown RBP9.3□□□□□ -0.92
PCDH15-229ENST00000616114 ATP6V1E2Q96A05 226 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 PCDH9Q9HC56 1237 aa9.3□□□□□ -0.92
PCDH15-229ENST00000616114 F8W8V4 182 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 NFIBO00712 420 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 WNT7AO00755 349 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 HSD17B4P51659 736 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 TPI1P60174 286 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 SV2CQ496J9 727 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ANGEL2Q5VTE6 544 aaKnown RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 CYP2W1Q8TAV3 490 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ETNPPLQ8TBG4 499 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PARD3BQ8TEW8 1205 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 NOD2Q9HC29 1040 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 EML4Q9HC35 981 aaKnown RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 RASSF10A6NK89 507 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 VCAM1P19320 739 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 SPRP35270 261 aaPredicted RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PTK6Q13882 451 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 Q3C1V9 767 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 KCNV2Q8TDN2 545 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PGBD4Q96DM1 585 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 STAMBPL1Q96FJ0 436 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PLEKHA5Q9HAU0 1116 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 CHORDC1Q9UHD1 332 aaPredicted RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PCYOX1Q9UHG3 505 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 DDX20Q9UHI6 824 aaKnown RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 HACL1Q9UJ83 578 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 LRFN2Q9ULH4 789 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PHTF1Q9UMS5 762 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 GOLGA8RI6L899 631 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 EPHB6O15197 1021 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 TM9SF1O15321 606 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PLA2G6O60733 806 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ATG4AQ8WYN0 398 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 DPEP1P16444 411 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 RPL21P46778 160 aaKnown RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 GTF2BQ00403 316 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 OCRLQ01968 901 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 EN1Q05925 392 aaPredicted RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 NME3Q13232 169 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 GOLGA7BQ2TAP0 167 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 C2orf69Q8N8R5 385 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 OR6J1Q8NGC5 347 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 E2F7Q96AV8 911 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ANKRD27Q96NW4 1050 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PURBQ96QR8 312 aaKnown RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 PPFIA2O75334 1257 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 TOMM70O94826 608 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 CYP1A2P05177 515 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 TGFB3P10600 412 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ELF1P32519 619 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ARHGEF6Q15052 776 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 GRIK5Q16478 980 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 CRY2Q49AN0 593 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 CAPRIN2Q6IMN6 1127 aaKnown RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ZPBP2Q6X784 338 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 FAM71DQ8N9W8 422 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 ZNF668Q96K58 619 aaPredicted RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 SEMA4AQ9H3S1 761 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 SMYD3Q9H7B4 428 aa9.29□□□□□ -0.92
PCDH15-229ENST00000616114 G3BP2Q9UN86 482 aaKnown RBP9.29□□□□□ -0.92
PCDH15-229ENST00000616114 C3orf70A6NLC5 250 aaPredicted RBP9.28□□□□□ -0.92
PCDH15-229ENST00000616114 POLBP06746 335 aa9.28□□□□□ -0.92
PCDH15-229ENST00000616114 CNTFP26441 200 aa9.28□□□□□ -0.92
PCDH15-229ENST00000616114 RGS7P49802 495 aa9.28□□□□□ -0.92
PCDH15-229ENST00000616114 LAMB3Q13751 1172 aa9.28□□□□□ -0.92
PCDH15-229ENST00000616114 CBWD6Q4V339 395 aa9.28□□□□□ -0.92
PCDH15-229ENST00000616114 CBWD3Q5JTY5 395 aa9.28□□□□□ -0.92
PCDH15-229ENST00000616114 CBWD5Q5RIA9 395 aa9.28□□□□□ -0.92
PCDH15-229ENST00000616114 RGS9BPQ6ZS82 235 aa9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms