RNA–Protein interactions for RNA: ENST00000614237.1

SENP3-EIF4A1-201, Transcript of SENP3-EIF4A1 readthrough (NMD candidate), humanhuman

APPRIS P1 TSL 2 BASIC

Gene SENP3-EIF4A1, Length 3,519 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-EIF4A1-201ENST00000614237 CPNE8Q86YQ8 564 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ALG13Q9NP73 1137 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MTRF1LQ9UGC7 380 aaKnown RBP11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 AGTPBP1Q9UPW5 1226 aa11.48□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SPDYE5A6NIY4 337 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RASGRF2O14827 1237 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 IVDP26440 423 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PIK3CAP42336 1068 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CTCFP49711 727 aaPredicted RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CNTN2Q02246 1040 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PPIL2Q13356 520 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MAMLD1Q13495 774 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CCNG2Q16589 344 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ZNF483Q8TF39 744 aaPredicted RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MSTO1Q9BUK6 570 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 VRTNQ9H8Y1 702 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 EFR3BQ9Y2G0 817 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RBM47A0AV96 593 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 NDC80O14777 642 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CAPN15O75808 1086 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 EDN1P05305 212 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 DLATP10515 647 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 NQO1P15559 274 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MMP8P22894 467 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 EIF4BP23588 611 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 STX2P32856 288 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 NSFP46459 744 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CCDC142Q17RM4 750 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SGSM1Q2NKQ1 1148 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 C6orf118Q5T5N4 469 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 CEP128Q6ZU80 1094 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 BBOF1Q8ND07 529 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ZC3H15Q8WU90 426 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ARHGEF2Q92974 986 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 EMID1Q96A84 441 aaPredicted RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 TMEM143Q96AN5 459 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 LHX5Q9H2C1 402 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ASIC3Q9UHC3 531 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ZNF236Q9UL36 1845 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PLXNA1Q9UIW2 1896 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 OGTO15294 1046 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SPOPO43791 374 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 GNAT1P11488 350 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 NEFHP12036 1026 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 IREB2P48200 963 aaKnown RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ADCY2Q08462 1091 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 FSTL1Q12841 308 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PRUNE1Q86TP1 453 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RHOT1Q8IXI2 618 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 LINC01465Q8N7H1 131 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RNF25Q96BH1 459 aaPredicted RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 FRMD8P1Q9BZ68 369 aaPredicted RBP11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PHACTR1Q9C0D0 580 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MROH8Q9H579 483 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ACP6Q9NPH0 428 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 PARVAQ9NVD7 372 aa11.47□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SORBS3O60504 671 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ECEL1O95672 775 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 WEE2P0C1S8 567 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 MSH2P43246 934 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 KYAT1Q16773 422 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ANKRD20A2Q5SQ80 823 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ANKRD20A1Q5TYW2 823 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 ANKRD20A3Q5VUR7 823 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 HAO1Q9UJM8 370 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 SLC45A1Q9Y2W3 748 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 RALGAPA2Q2PPJ7 1873 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 COL1A2P08123 1366 aa11.46□□□□□ -0.57
SENP3-EIF4A1-201ENST00000614237 STAU1O95793 577 aaKnown RBP11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 AGTP01019 485 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CALB1P05937 261 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TNNI1P19237 187 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NOP14P78316 857 aaKnown RBP11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 GADD45GIP1Q8TAE8 222 aaPredicted RBP11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CCHCR1Q8TD31 782 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 C1orf54Q8WWF1 131 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 DCLK3Q9C098 648 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NSRP1Q9H0G5 558 aaKnown RBP11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 IP6K2Q9UHH9 426 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ANAPC7Q9UJX3 599 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NUB1Q9Y5A7 615 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 CSADQ9Y600 493 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 USH1CQ9Y6N9 552 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TMEM120BA0PK00 339 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 THAP12O43422 761 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MGRN1O60291 552 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 IL18RAPO95256 599 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RRM1P23921 792 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TCF7P36402 384 aaPredicted RBP11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 RANBP1P43487 201 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 MMP13P45452 471 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 XRCC4Q13426 336 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 NCOA4Q13772 614 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 C2CD6Q53TS8 623 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 EGFL6Q8IUX8 553 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 ATL2Q8NHH9 583 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 SPOCK2Q92563 424 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TSC22D3Q99576 134 aa11.46□□□□□ -0.58
SENP3-EIF4A1-201ENST00000614237 TARS2Q9BW92 718 aaKnown RBP11.46□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms