RNA–Protein interactions for RNA: ENST00000610556.4

SYNPO2-206, Transcript of synaptopodin 2, humanhuman

TSL 1 (best) BASIC

Gene SYNPO2, Length 3,934 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-206ENST00000610556 C1orf146Q5VVC0 180 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 DAW1Q8N136 415 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 CENPTQ96BT3 561 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SCYL1Q96KG9 808 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 TEX13BQ9BXU2 312 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SHCBP1LQ9BZQ2 653 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 DHX35Q9H5Z1 703 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 PXMP2Q9NR77 195 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 METTL5Q9NRN9 209 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 ASNSD1Q9NWL6 643 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 ZNRF3Q9ULT6 936 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 NFS1Q9Y697 457 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 KRT16P08779 473 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 PAX7P23759 505 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 EPHB2P29323 1055 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 RPA3P35244 121 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 PTGIRP43119 386 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 RAP1GAPP47736 663 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SESN2P58004 480 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 ZNF200P98182 395 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 GTF2BQ00403 316 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 IFRD2Q12894 506 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 KCTD2Q14681 263 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 GEN1Q17RS7 908 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SWT1Q5T5J6 900 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SPOCD1Q6ZMY3 1216 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 ZNF677Q86XU0 584 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SIAH1Q8IUQ4 282 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 MAP4K3Q8IVH8 894 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 EXD1Q8NHP7 514 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 CKAP2Q8WWK9 683 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 ATXN2LQ8WWM7 1075 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 TLCD1Q96CP7 247 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 FAM49AQ9H0Q0 323 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 MYLK2Q9H1R3 596 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 VPS11Q9H270 941 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 RANBP17Q9H2T7 1088 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 LRRC19Q9H756 370 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 MANSC1Q9H8J5 431 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SLC38A10Q9HBR0 1119 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 ZDHHC18Q9NUE0 388 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 ZC3H7BQ9UGR2 993 aaKnown RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 GGA2Q9UJY4 613 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 FIS1Q9Y3D6 152 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 MYH13Q9UKX3 1938 aa7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 CICQ96RK0 1608 aaPredicted RBP7.21□□□□□ -1.26
SYNPO2-206ENST00000610556 SPECC1L-ADORA2AF8WAN1 911 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 FSCN2O14926 492 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CFLARO15519 480 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 KRT38O76015 456 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CHRM1P11229 460 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CHRNB2P17787 502 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 GARTP22102 1010 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ADRA1DP25100 572 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 YY1P25490 414 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SNX16P57768 344 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SNRPFP62306 86 aaKnown RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SLC15A2Q16348 729 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 TFDP3Q5H9I0 405 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MROH9Q5TGP6 573 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ATG16L1Q676U5 607 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 RAPH1Q70E73 1250 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ARID3BQ8IVW6 561 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ARMC2Q8NEN0 867 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 AKT1S1Q96B36 256 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 PAFAH2Q99487 392 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 TSC22D3Q99576 134 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 NIF3L1Q9GZT8 377 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 DEFB129Q9H1M3 183 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CISHQ9NSE2 258 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 PCMTD2Q9NV79 361 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 DMAC2Q9NW81 257 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 GPATCH2LQ9NWQ4 482 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 COL20A1Q9P218 1284 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 NUP188Q5SRE5 1749 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 LRP6O75581 1613 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ASTN2O75129 1339 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SRRM3A6NNA2 597 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 B2RBV5 119 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 TRIM49D1C9J1S8 452 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 H3BRJ5 948 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SDC4P31431 198 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ABCD1P33897 745 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CDH8P55286 799 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 GCNT1Q02742 428 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 EN1Q05925 392 aaPredicted RBP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 PTK6Q13882 451 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 SGSM1Q2NKQ1 1148 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 GRAMD1BQ3KR37 738 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 TRIM42Q8IWZ5 723 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 MED10Q9BTT4 135 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 THTPAQ9BU02 230 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 LRRC4CQ9HCJ2 640 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 STAU2Q9NUL3 570 aaKnown RBP eCLIP7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 FAM49BQ9NUQ9 324 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 HOXC10Q9NYD6 342 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 AGAP1Q9UPQ3 857 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 CCDC78A2IDD5 438 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ZWINTO95229 277 aa7.2□□□□□ -1.26
SYNPO2-206ENST00000610556 ECHS1P30084 290 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms