RNA–Protein interactions for RNA: ENST00000610455.4

DEF8-228, Transcript of differentially expressed in FDCP 8 homolog, humanhuman

TSL 1 (best) BASIC

Gene DEF8, Length 816 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEF8-228ENST00000610455 LRRTM3Q86VH5 581 aa18.9■□□□□ 0.62
DEF8-228ENST00000610455 WDR5BQ86VZ2 330 aa18.9■□□□□ 0.62
DEF8-228ENST00000610455 SYNPOQ8N3V7 929 aa18.9■□□□□ 0.62
DEF8-228ENST00000610455 GIPC2Q8TF65 315 aa18.9■□□□□ 0.62
DEF8-228ENST00000610455 PARVGQ9HBI0 331 aa18.9■□□□□ 0.62
DEF8-228ENST00000610455 BLOC1S4Q9NUP1 217 aa18.9■□□□□ 0.62
DEF8-228ENST00000610455 NUP205Q92621 2012 aa18.9■□□□□ 0.62
DEF8-228ENST00000610455 TISP43B9A030 160 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 ANKRD63C9JTQ0 380 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 CYB561D2O14569 222 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 TRAK2O60296 914 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 PAX3P23760 479 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 PXNP49023 591 aaPredicted RBP18.89■□□□□ 0.61
DEF8-228ENST00000610455 MCM2P49736 904 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 GCNAQ96QF7 691 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 FIZ1Q96SL8 496 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 PYM1Q9BRP8 204 aaKnown RBP18.89■□□□□ 0.61
DEF8-228ENST00000610455 ZHX3Q9H4I2 956 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 GKN1Q9NS71 199 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 THG1LQ9NWX6 298 aaKnown RBP18.89■□□□□ 0.61
DEF8-228ENST00000610455 DERAQ9Y315 318 aa18.89■□□□□ 0.61
DEF8-228ENST00000610455 OTOL1A6NHN0 477 aaPredicted RBP18.88■□□□□ 0.61
DEF8-228ENST00000610455 AXIN1O15169 862 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 SCP2P22307 547 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 NMT1P30419 496 aaKnown RBP18.88■□□□□ 0.61
DEF8-228ENST00000610455 MCM6Q14566 821 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 CCDC6Q16204 474 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 ZC2HC1CQ53FD0 456 aaPredicted RBP18.88■□□□□ 0.61
DEF8-228ENST00000610455 TMEM150AQ86TG1 271 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 CMTM8Q8IZV2 173 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 CHFRQ96EP1 664 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 AK8Q96MA6 479 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 FAM83CQ9BQN1 747 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 HPS4Q9NQG7 708 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 DSEQ9UL01 958 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 CCL26Q9Y258 94 aa18.88■□□□□ 0.61
DEF8-228ENST00000610455 HAPLN1P10915 354 aaPredicted RBP18.87■□□□□ 0.61
DEF8-228ENST00000610455 KCNA4P22459 653 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 TAF6P49848 677 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 GTF2BQ00403 316 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 SF3A2Q15428 464 aaKnown RBP18.87■□□□□ 0.61
DEF8-228ENST00000610455 TAF12Q16514 161 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 TMEM196Q5HYL7 178 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 WSCD1Q658N2 575 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 TRIM68Q6AZZ1 485 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 FSTL4Q6MZW2 842 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 METTL23Q86XA0 190 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 THEM5Q8N1Q8 247 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 MAB21L3Q8N8X9 362 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 SPPL2BQ8TCT7 592 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 CALML4Q96GE6 196 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 ARRDC1-AS1Q9H2J1 176 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 IKZF4Q9H2S9 585 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 EBF3Q9H4W6 596 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 ASB7Q9H672 318 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 DPP3Q9NY33 737 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 ABI2Q9NYB9 513 aaPredicted RBP18.87■□□□□ 0.61
DEF8-228ENST00000610455 C2CD2Q9Y426 696 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 KIF3AQ9Y496 699 aa18.87■□□□□ 0.61
DEF8-228ENST00000610455 LAMA1P25391 3075 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 SLC26A4O43511 780 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 FOXD2O60548 495 aaPredicted RBP18.86■□□□□ 0.61
DEF8-228ENST00000610455 KRT18P05783 430 aaKnown RBP18.86■□□□□ 0.61
DEF8-228ENST00000610455 HMGA1P17096 107 aaKnown RBP18.86■□□□□ 0.61
DEF8-228ENST00000610455 PLCG1P19174 1290 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 UBA7P41226 1012 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 GRIN1Q05586 938 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 RUNX3Q13761 415 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 ST3GAL2Q16842 350 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 ADALQ6DHV7 355 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 STKLD1Q8NE28 680 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 RIN3Q8TB24 985 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 C2orf15Q8WU43 125 aaKnown RBP18.86■□□□□ 0.61
DEF8-228ENST00000610455 GAB3Q8WWW8 586 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 RAD54LQ92698 747 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 USP13Q92995 863 aaPredicted RBP18.86■□□□□ 0.61
DEF8-228ENST00000610455 TMLHEQ9NVH6 421 aa18.86■□□□□ 0.61
DEF8-228ENST00000610455 POLR3BQ9NW08 1133 aaPredicted RBP18.86■□□□□ 0.61
DEF8-228ENST00000610455 THADAQ6YHU6 1953 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 PTPRDP23468 1912 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 H3BQV1 296 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 RPP40O75818 363 aaKnown RBP18.85■□□□□ 0.61
DEF8-228ENST00000610455 F11P03951 625 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 GJB2P29033 226 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 AVPR1AP37288 418 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 GPR15P49685 360 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 NLRP12P59046 1061 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 GRSF1Q12849 480 aaKnown RBP eCLIP18.85■□□□□ 0.61
DEF8-228ENST00000610455 KARSQ15046 597 aaKnown RBP18.85■□□□□ 0.61
DEF8-228ENST00000610455 PTPAQ15257 358 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 AASDHQ4L235 1098 aaPredicted RBP18.85■□□□□ 0.61
DEF8-228ENST00000610455 TXNDC8Q6A555 127 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 CRELD2Q6UXH1 353 aaPredicted RBP18.85■□□□□ 0.61
DEF8-228ENST00000610455 KBTBD6Q86V97 674 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 EFCAB13Q8IY85 973 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 CCSER1Q9C0I3 900 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 RXFP3Q9NSD7 469 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 AGO2Q9UKV8 859 aaKnown RBP18.85■□□□□ 0.61
DEF8-228ENST00000610455 STYXL1Q9Y6J8 313 aa18.85■□□□□ 0.61
DEF8-228ENST00000610455 USP24Q9UPU5 2620 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms