RNA–Protein interactions for RNA: ENST00000610288.4

COL25A1-208, Transcript of collagen type XXV alpha 1 chain, humanhuman

TSL 5 BASIC

Gene COL25A1, Length 4,799 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1-208ENST00000610288 DUX4L7P0CJ90 424 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 ENO3P13929 434 aaPredicted RBP9.55□□□□□ -0.88
COL25A1-208ENST00000610288 PON1P27169 355 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 PRAMEP78395 509 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 TNFAIP2Q03169 654 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 BTKQ06187 659 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 ARHGEF26Q96DR7 871 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 KLF6Q99612 283 aaPredicted RBP9.55□□□□□ -0.88
COL25A1-208ENST00000610288 DUX4Q9UBX2 424 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 SLC24A2Q9UI40 661 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 GRID1Q9ULK0 1009 aa9.55□□□□□ -0.88
COL25A1-208ENST00000610288 SHOX2O60902 331 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 NLRP11P59045 1033 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 OVGP1Q12889 678 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CCDC153Q494R4 210 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 MTHFD1LQ6UB35 978 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 FRA10AC1Q70Z53 315 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 SH3RF1Q7Z6J0 888 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 MTMR4Q9NYA4 1195 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 HERC5Q9UII4 1024 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 RABGEF1Q9UJ41 708 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 BLOC1S6Q9UL45 172 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CDY2AQ9Y6F7 541 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CDY1Q9Y6F8 540 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 SLC12A1Q13621 1099 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 VPS72Q15906 364 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 TTC39BQ5VTQ0 682 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 MTDHQ86UE4 582 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 MARCH10Q8NA82 808 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 TIPINQ9BVW5 301 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 MRPL1Q9BYD6 325 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 SAR1AQ9NR31 198 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CIDEBQ9UHD4 219 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 XPO7Q9UIA9 1087 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 TEKT2Q9UIF3 430 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 PCDHB2Q9Y5E7 798 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 PCDHGC5Q9Y5F6 944 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 H0Y626 953 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 UBE2Q2LH0YL09 131 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CSPG5O95196 566 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 MYBP10242 640 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 SDC4P31431 198 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 PIGHQ14442 188 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 TMTC4Q5T4D3 741 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 RWDD4Q6NW29 188 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 LDHDQ86WU2 507 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 PPIL6Q8IXY8 311 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 GPD1LQ8N335 351 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 GALNT4Q8N4A0 578 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 ZFRQ96KR1 1074 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 ZBTB18Q99592 522 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 POLR3FQ9H1D9 316 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CYP39A1Q9NYL5 469 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 PRELID1Q9Y255 219 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 DAGLAQ9Y4D2 1042 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 ITGA4P13612 1032 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CHRNA5P30532 468 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 GPC3P51654 580 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CDH6P55285 790 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 GRB10Q13322 594 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 SF3B3Q15393 1217 aaKnown RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 B3GNT6Q6ZMB0 384 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF571Q7Z3V5 609 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF34Q8IZ26 560 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 DRAXINQ8NBI3 349 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 ATP8B4Q8TF62 1192 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 LENG1Q96BZ8 264 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF668Q96K58 619 aaPredicted RBP9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CNBD2Q96M20 576 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 CCDC28BQ9BUN5 200 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 SUGT1Q9Y2Z0 365 aa9.54□□□□□ -0.88
COL25A1-208ENST00000610288 NEXMIFQ5QGS0 1516 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 CCDC166P0CW27 439 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 RPA1P27694 616 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 PMLP29590 882 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF543Q08ER8 600 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 FLOT2Q14254 428 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 LRRC74BQ6ZQY2 392 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF677Q86XU0 584 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 TMPRSS6Q8IU80 811 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 TMEM139Q8IV31 216 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 RBM12BQ8IXT5 1001 aaKnown RBP9.53□□□□□ -0.88
COL25A1-208ENST00000610288 LRRIQ1Q96JM4 1722 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 KLHL4Q9C0H6 718 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 ABCF3Q9NUQ8 709 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 PCMTD2Q9NV79 361 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 HSPBP1Q9NZL4 362 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 ZNF212Q9UDV6 495 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 SMIM31A0A1B0GVY4 71 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 AIM2O14862 343 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 KIAA0391O15091 583 aaKnown RBP9.53□□□□□ -0.88
COL25A1-208ENST00000610288 RALAP11233 206 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 GZMAP12544 262 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 AP3M2P53677 418 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 ACTR2P61160 394 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 XRCC4Q13426 336 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 CHI3L2Q15782 390 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 PCNX4Q63HM2 1172 aa9.53□□□□□ -0.88
COL25A1-208ENST00000610288 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.53□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms