RNA–Protein interactions for RNA: ENST00000609021.1

HDDC2-208, Transcript of HD domain containing 2, humanhuman

Gene HDDC2, Length 3,529 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC2-208ENST00000609021 NUMBLQ9Y6R0 609 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 C17orf113A0A1B0GUU1 675 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CLRN2A0PK11 232 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 C16orf96A6NNT2 1141 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 DNALI1O14645 258 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 TNPO2O14787 897 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FGF18O76093 207 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 APBB3O95704 486 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 TCP1P17987 556 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PRCPP42785 496 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ABCG1P45844 678 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 EPHB4P54760 987 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 P2RX3P56373 397 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 HAND2P61296 217 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 EFTUD2Q15029 972 aaKnown RBP eCLIP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PXDC1Q5TGL8 231 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FOXB2Q5VYV0 432 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 SPOPLQ6IQ16 392 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 EMBQ6PCB8 327 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 SLC30A10Q6XR72 485 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CCNI2Q6ZMN8 369 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 MAMDC2Q7Z304 686 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 VSIG1Q86XK7 387 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 BBS7Q8IWZ6 715 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 DIS3L2Q8IYB7 885 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 SCFD2Q8WU76 684 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 IFT43Q96FT9 208 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CHMP6Q96FZ7 201 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CMTM3Q96MX0 182 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FERMT1Q9BQL6 677 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 HERPUD2Q9BSE4 406 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 DESI2Q9BSY9 194 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 WACQ9BTA9 647 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ETNK1Q9HBU6 452 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 KCNQ5Q9NR82 932 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ATP8A2Q9NTI2 1148 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PAQR5Q9NXK6 330 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 FBXO10Q9UK96 956 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 DUSP12Q9UNI6 340 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 AXIN2Q9Y2T1 843 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 MTF2Q9Y483 593 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PXDNQ92626 1479 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PRR36Q9H6K5 1346 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ERVV-2B6SEH9 535 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 UBXN8O00124 270 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 GNB5O14775 395 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 SUN1O94901 812 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 IFIT1P09914 478 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 KRT3P12035 628 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 RCVRNP35243 200 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 COPS2P61201 443 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 EEF1A1P68104 462 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PPARDQ03181 441 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 EEF1A2Q05639 463 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CNGA2Q16280 664 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 MAPKAPK3Q16644 382 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 MINDY4Q4G0A6 757 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ANKRD20A4Q4UJ75 823 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 EEF1A1P5Q5VTE0 462 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 NIPAL1Q6NVV3 410 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PIK3AP1Q6ZUJ8 805 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 RHOUQ7L0Q8 258 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 DNAJB7Q7Z6W7 309 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 TTC5Q8N0Z6 440 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PIK3C3Q8NEB9 887 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 OR6C4Q8NGE1 309 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ATP2A3Q93084 1043 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 LRGUKQ96M69 825 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 INPP4AQ96PE3 977 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 KATNAL1Q9BW62 490 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PAIP1Q9H074 479 aaKnown RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 NT5C3AQ9H0P0 336 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 ASCC2Q9H1I8 757 aaPredicted RBP4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CD209Q9NNX6 404 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PRDM11Q9NQV5 511 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 CYP39A1Q9NYL5 469 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 RRN3Q9NYV6 651 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 STARD13Q9Y3M8 1113 aa4.96□□□□□ -1.62
HDDC2-208ENST00000609021 PDS5AQ29RF7 1337 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PRR23AA6NEV1 266 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PHF20L1A8MW92 1017 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 B4E1Z4 1266 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PRRT4C9JH25 899 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 AGPSO00116 658 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CTNND1O60716 968 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 RECKO95980 971 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CFBP00751 764 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 LTA4HP09960 611 aaKnown RBP4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ITGA2P17301 1181 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 HLA-FP30511 346 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PHKA1P46020 1223 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 AKR1D1P51857 326 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 NUBP1P53384 320 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 VAC14Q08AM6 782 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 CUL4AQ13619 759 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 ERICH5Q6P6B1 374 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 FRA10AC1Q70Z53 315 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 KCTD20Q7Z5Y7 419 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 PRUNE1Q86TP1 453 aa4.95□□□□□ -1.62
HDDC2-208ENST00000609021 SFR1Q86XK3 245 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms