RNA–Protein interactions for RNA: ENST00000608425.5

CTCFL-217, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,915 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-217ENST00000608425 CCSER1Q9C0I3 900 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 PAIP1Q9H074 479 aaKnown RBP12.5□□□□□ -0.41
CTCFL-217ENST00000608425 EHD1Q9H4M9 534 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 MAN1C1Q9NR34 630 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 TMOD2Q9NZR1 351 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 AMFRQ9UKV5 643 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 FRMD4BQ9Y2L6 1034 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 IGSF9BQ9UPX0 1349 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 ANKRD34BA5PLL1 514 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 IQCA1LA6NCM1 817 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 A8MXQ7 604 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 POLRMTO00411 1230 aaKnown RBP12.5□□□□□ -0.41
CTCFL-217ENST00000608425 LMNB2Q03252 620 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 TRIP13Q15645 432 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-217ENST00000608425 FXNQ16595 210 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 FAM47AQ5JRC9 791 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 AMIGO2Q86SJ2 522 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 SRBD1Q8N5C6 995 aaKnown RBP12.5□□□□□ -0.41
CTCFL-217ENST00000608425 RBM15BQ8NDT2 890 aaKnown RBP12.5□□□□□ -0.41
CTCFL-217ENST00000608425 C7orf43Q8WVR3 580 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 DCUN1D5Q9BTE7 237 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
CTCFL-217ENST00000608425 ZNF287Q9HBT7 754 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 KCNQ5Q9NR82 932 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 ZDHHC7Q9NXF8 308 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 DKK3Q9UBP4 350 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 AK5Q9Y6K8 562 aa12.5□□□□□ -0.41
CTCFL-217ENST00000608425 NOTOA8MTQ0 251 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 NMT2O60551 498 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 PLCG1P19174 1290 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 ABCB4P21439 1286 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 TRAPPC10P48553 1259 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 DRG2P55039 364 aaKnown RBP12.49□□□□□ -0.41
CTCFL-217ENST00000608425 ACTR3P61158 418 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 TRIP10Q15642 601 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 KCNJ8Q15842 424 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 ADRM1Q16186 407 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 PFKFB3Q16875 520 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-217ENST00000608425 SYCP2LQ5T4T6 812 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 CENPPQ6IPU0 288 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 SPOPLQ6IQ16 392 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 CCDC137Q6PK04 289 aaKnown RBP12.49□□□□□ -0.41
CTCFL-217ENST00000608425 DHDDSQ86SQ9 333 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 C4orf32Q8N8J7 132 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 Q8N9G6 341 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-217ENST00000608425 PYROXD1Q8WU10 500 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 FAM172AQ8WUF8 416 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 ART4Q93070 314 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 BHMT2Q9H2M3 363 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 POU2F3Q9UKI9 436 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 GOLGA8TH3BQL2 631 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 TRPA1O75762 1119 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 ENO1P06733 434 aaKnown RBP12.49□□□□□ -0.41
CTCFL-217ENST00000608425 GOLGA8HP0CJ92 632 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 CIITAP33076 1130 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 UBA7P41226 1012 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 MYBPC1Q00872 1141 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 KDSRQ06136 332 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 NR1D2Q14995 579 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 CYP2A13Q16696 494 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 GRAMD1BQ3KR37 738 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 PUS10Q3MIT2 529 aaKnown RBP12.49□□□□□ -0.41
CTCFL-217ENST00000608425 NANOGP8Q6NSW7 305 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 IRF2BP2Q7Z5L9 587 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 ANKMY2Q8IV38 441 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 ULK2Q8IYT8 1036 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 DENND1AQ8TEH3 1009 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 C9orf72Q96LT7 481 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 CNBD2Q96M20 576 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 XAB2Q9HCS7 855 aaKnown RBP12.49□□□□□ -0.41
CTCFL-217ENST00000608425 FLT1P17948 1338 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 EMSYQ7Z589 1322 aa12.49□□□□□ -0.41
CTCFL-217ENST00000608425 THRAP10827 490 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 CDH3P22223 829 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 NR4A1P22736 598 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 GNA11P29992 359 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 ATP5DP30049 168 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 TFAP4Q01664 338 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 DHX34Q14147 1143 aaKnown RBP12.48□□□□□ -0.41
CTCFL-217ENST00000608425 LRRC55Q6ZSA7 311 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 DYMQ7RTS9 669 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 SLC51AQ86UW1 340 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 TMPRSS6Q8IU80 811 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 LZTR1Q8N653 840 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 GRIN3AQ8TCU5 1115 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 ZNF75CPQ92670 426 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-217ENST00000608425 KRT35Q92764 455 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 RBM15Q96T37 977 aaKnown RBP eCLIP12.48□□□□□ -0.419e-11■□□□□ 8.6
CTCFL-217ENST00000608425 VTA1Q9NP79 307 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 SH3GLB2Q9NR46 395 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 PCDHA4Q9UN74 947 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.48□□□□□ -0.41
CTCFL-217ENST00000608425 GAKO14976 1311 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 PHF2O75151 1096 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 TTLL1O95922 423 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 MUTP22033 750 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 PHKA2P46019 1235 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 RAP1GDS1P52306 607 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 PDK1Q15118 436 aa12.48□□□□□ -0.41
CTCFL-217ENST00000608425 GRIK5Q16478 980 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 78.9 ms