RNA–Protein interactions for RNA: ENST00000607212.1

CTSA-216, Transcript of cathepsin A, humanhuman

TSL 4

Gene CTSA, Length 590 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-216ENST00000607212 SRSF5Q13243 272 aaKnown RBP16.05■□□□□ 0.16
CTSA-216ENST00000607212 GAS6Q14393 721 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 SF3A1Q15459 793 aaKnown RBP16.05■□□□□ 0.16
CTSA-216ENST00000607212 SV2CQ496J9 727 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 WSCD1Q658N2 575 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 TXNDC11Q6PKC3 985 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 LONP2Q86WA8 852 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 SPPL2BQ8TCT7 592 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 OBP2AQ9NY56 170 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 CCDC39Q9UFE4 941 aa16.05■□□□□ 0.16
CTSA-216ENST00000607212 PRPF40AO75400 957 aaKnown RBP16.04■□□□□ 0.16
CTSA-216ENST00000607212 ATF6P18850 670 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 TFAMQ00059 246 aaKnown RBP16.04■□□□□ 0.16
CTSA-216ENST00000607212 GTF2BQ00403 316 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 GRIN1Q05586 938 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 ITPRIPL2Q3MIP1 535 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 CC2D1AQ6P1N0 951 aaPredicted RBP16.04■□□□□ 0.16
CTSA-216ENST00000607212 MAMSTRQ6ZN01 415 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 BRAPQ7Z569 592 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 SFR1Q86XK3 245 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 LRRC15Q8TF66 581 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 C2orf15Q8WU43 125 aaKnown RBP16.04■□□□□ 0.16
CTSA-216ENST00000607212 MRPL44Q9H9J2 332 aaKnown RBP16.04■□□□□ 0.16
CTSA-216ENST00000607212 TBC1D7Q9P0N9 293 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 HSFX1Q9UBD0 423 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 EXOC7Q9UPT5 735 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 R3HCC1Q9Y3T6 440 aaKnown RBP16.04■□□□□ 0.16
CTSA-216ENST00000607212 C2CD2Q9Y426 696 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 PCDHB5Q9Y5E4 795 aa16.04■□□□□ 0.16
CTSA-216ENST00000607212 ATG2BQ96BY7 2078 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 ANO9A1A5B4 782 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 HRO43593 1189 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 IL18RAPO95256 599 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 CYP11A1P05108 521 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 ADRB2P07550 413 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 HAPLN1P10915 354 aaPredicted RBP16.03■□□□□ 0.16
CTSA-216ENST00000607212 CNR2P34972 360 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 TXLNAP40222 546 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 SMARCB1Q12824 385 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 POSTNQ15063 836 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 SYCP3Q8IZU3 236 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 MAB21L3Q8N8X9 362 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 NETO1Q8TDF5 533 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 MRPS31Q92665 395 aaKnown RBP16.03■□□□□ 0.16
CTSA-216ENST00000607212 LRRC3BQ96PB8 259 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 FAM213AQ9BRX8 229 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 PI4K2AQ9BTU6 479 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 MKNK1Q9BUB5 465 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 GKN1Q9NS71 199 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 SEMA4GQ9NTN9 838 aa16.03■□□□□ 0.16
CTSA-216ENST00000607212 DCHS1Q96JQ0 3298 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 KPNA7A9QM74 516 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 GCNT3O95395 438 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 CD2BP2O95400 341 aaKnown RBP16.02■□□□□ 0.16
CTSA-216ENST00000607212 KRT19P08727 400 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 DDIT3P35638 169 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 GRSF1Q12849 480 aaKnown RBP eCLIP16.02■□□□□ 0.16
CTSA-216ENST00000607212 RRAGBQ5VZM2 374 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 PRR23CQ6ZRP0 262 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 CMTM8Q8IZV2 173 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 STKLD1Q8NE28 680 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 KCNN1Q92952 543 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 CNTNAP3BQ96NU0 1288 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 SLC46A2Q9BY10 475 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 CNTNAP3Q9BZ76 1288 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 EBF3Q9H4W6 596 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 TRPC7Q9HCX4 862 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 SLC8A2Q9UPR5 921 aa16.02■□□□□ 0.16
CTSA-216ENST00000607212 CACNA1AO00555 2505 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 AXIN1O15169 862 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 HUS1O60921 280 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 LRP3O75074 770 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 CCDC192P0DO97 292 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 IDEP14735 1019 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 POLR2BP30876 1174 aaKnown RBP16.01■□□□□ 0.15
CTSA-216ENST00000607212 PNPLA4P41247 253 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 GPR15P49685 360 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 AMPD2Q01433 879 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 MYL7Q01449 175 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 AASDHQ4L235 1098 aaPredicted RBP16.01■□□□□ 0.15
CTSA-216ENST00000607212 SDHAF4Q5VUM1 108 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 TRIM68Q6AZZ1 485 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 LRRTM3Q86VH5 581 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 EFCAB13Q8IY85 973 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 SYNPOQ8N3V7 929 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 C12orf50Q8NA57 414 aaPredicted RBP16.01■□□□□ 0.15
CTSA-216ENST00000607212 CACTINQ8WUQ7 758 aaKnown RBP16.01■□□□□ 0.15
CTSA-216ENST00000607212 HVCN1Q96D96 273 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 SAAL1Q96ER3 474 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 EPSTI1Q96J88 318 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 ACCSQ96QU6 501 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 IKZF4Q9H2S9 585 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 IL21Q9HBE4 155 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 ZMYM5Q9UJ78 669 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 AGAP1Q9UPQ3 857 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 DENND4CQ5VZ89 1909 aa16.01■□□□□ 0.15
CTSA-216ENST00000607212 DMXL1Q9Y485 3027 aa16■□□□□ 0.15
CTSA-216ENST00000607212 K7ESF4 209 aa16■□□□□ 0.15
CTSA-216ENST00000607212 ITGB3P05106 788 aa16■□□□□ 0.15
CTSA-216ENST00000607212 CSH1P0DML2 217 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms