RNA–Protein interactions for RNA: ENST00000602557.5

CSMD1-216, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 11,740 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-216ENST00000602557 EZH1Q92800 747 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ABHD8Q96I13 439 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 FHDC1Q9C0D6 1143 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RAVER2Q9HCJ3 691 aaKnown RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 SMG5Q9UPR3 1016 aaKnown RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 KLHL41O60662 606 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 IMPDH2P12268 514 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 SLC9A1P19634 815 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 CRKP46108 304 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ATAD3BQ5T9A4 648 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 SUSD4Q5VX71 490 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ELMOD1Q8N336 334 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RFFLQ8WZ73 363 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 SH3KBP1Q96B97 665 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF446Q9NWS9 450 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 WDR19Q8NEZ3 1342 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 BFSP2Q13515 415 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 DDI2Q5TDH0 399 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RBBP8NLQ8NC74 664 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PACSIN1Q9BY11 444 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 KIAA1586Q9HCI6 787 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ARHGEF3Q9NR81 526 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 SELENONQ9NZV5 590 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 UTYO14607 1347 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 CASZ1Q86V15 1759 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 UBA6A0AVT1 1052 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 MOCS2O96007 188 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 CACNB2Q08289 660 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 CDKL3Q8IVW4 592 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ANKZF1Q9H8Y5 726 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 FAM217BQ9NTX9 383 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RBAKQ9NYW8 714 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RABGEF1Q9UJ41 708 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 KCNN4O15554 427 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PHF2O75151 1096 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RAG1P15918 1043 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 TRAF2Q12933 501 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ZNF618Q5T7W0 954 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PPP1R18Q6NYC8 613 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 AGAP11Q8TF27 550 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 BARHL2Q9NY43 387 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ROBO2Q9HCK4 1378 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 FAM58BPP0C7Q3 252 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PTK7Q13308 1070 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ZBTB46Q86UZ6 589 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 HPS3Q969F9 1004 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 EML4Q9HC35 981 aaKnown RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 CLIC5Q9NZA1 410 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 TELO2Q9Y4R8 837 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 NCAPD2Q15021 1401 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 MYO1DO94832 1006 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 KLHL2O95198 593 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 CCDC130P13994 396 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 SERPINB5P36952 375 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 TRIP4Q15650 581 aaPredicted RBP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 STX19Q8N4C7 294 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 RBM15Q96T37 977 aaKnown RBP eCLIP9.07□□□□□ -0.96
CSMD1-216ENST00000602557 COA1Q9GZY4 146 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 TMBIM4Q9HC24 238 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 CACNA2D2Q9NY47 1150 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 PRELID1Q9Y255 219 aa9.07□□□□□ -0.96
CSMD1-216ENST00000602557 ADGRA3Q8IWK6 1321 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 NEK10Q6ZWH5 1172 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 MB21D2Q8IYB1 491 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 EIF2AK1Q9BQI3 630 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 PHTF1Q9UMS5 762 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SNAP23O00161 211 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 CYTH3O43739 400 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 LRRC49Q8IUZ0 686 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 TINF2Q9BSI4 451 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ROGDIQ9GZN7 287 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 GPBP1L1Q9HC44 474 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ARHGEF38Q9NXL2 777 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 CORO1CQ9ULV4 474 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 TCHHL1Q5QJ38 904 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 IL31Q6EBC2 164 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SYNE4Q8N205 404 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 TCAIMQ8N3R3 496 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SPATA33Q96N06 139 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 MMP10P09238 476 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 EIF3EP60228 445 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 IRGCQ6NXR0 463 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 JAMLQ86YT9 394 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 DCP1AQ9NPI6 582 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ERBB3P21860 1342 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ADCY6O43306 1168 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 APRTP07741 180 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 EGFL6Q8IUX8 553 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 KBTBD2Q8IY47 623 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 MRPL4Q9BYD3 311 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 QTRT2Q9H974 415 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 ZC3H7BQ9UGR2 993 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 MAD2L2Q9UI95 211 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 PRG3Q9Y2Y8 225 aaPredicted RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 PRDX5P30044 214 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 QARSP47897 775 aaKnown RBP9.06□□□□□ -0.96
CSMD1-216ENST00000602557 SGSM1Q2NKQ1 1148 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 COBLL1Q53SF7 1204 aa9.06□□□□□ -0.96
CSMD1-216ENST00000602557 TRIM72Q6ZMU5 477 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms