RNA–Protein interactions for RNA: ENST00000599689.1

SHD-204, Transcript of Src homology 2 domain containing transforming protein D, humanhuman

TSL 5 BASIC

Gene SHD, Length 1,729 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHD-204ENST00000599689 LONRF2Q1L5Z9 754 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 BEND6Q5SZJ8 279 aaPredicted RBP24.47■■□□□ 1.51
SHD-204ENST00000599689 TMEM35BQ8NCS4 154 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 CXCL16Q9H2A7 254 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 NXF3Q9H4D5 531 aaKnown RBP24.47■■□□□ 1.51
SHD-204ENST00000599689 ANAPC7Q9UJX3 599 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 HES2Q9Y543 173 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 CTNNA2P26232 953 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 CDH5P33151 784 aaPredicted RBP24.47■■□□□ 1.51
SHD-204ENST00000599689 RAD23BP54727 409 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 MRPS6P82932 125 aaKnown RBP24.47■■□□□ 1.51
SHD-204ENST00000599689 SHHQ15465 462 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 FAM47CQ5HY64 1035 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 UBXN11Q5T124 520 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 MMS22LQ6ZRQ5 1243 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 ALG3Q92685 438 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 ZMAT2Q96NC0 199 aaKnown RBP24.47■■□□□ 1.51
SHD-204ENST00000599689 PPP1R12CQ9BZL4 782 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 HIPK3Q9H422 1215 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 FAM124BQ9H5Z6 455 aaPredicted RBP24.47■■□□□ 1.51
SHD-204ENST00000599689 TRMT13Q9NUP7 481 aaKnown RBP24.47■■□□□ 1.51
SHD-204ENST00000599689 CNTN3Q9P232 1028 aa24.47■■□□□ 1.51
SHD-204ENST00000599689 LAMA3Q16787 3333 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 MED7O43513 233 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 SPOPO43791 374 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 CILPO75339 1184 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 RECQL4O94761 1208 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 MMP8P22894 467 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 C2CD6Q53TS8 623 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 PLEKHA7Q6IQ23 1121 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 GDF6Q6KF10 455 aaPredicted RBP24.46■■□□□ 1.51
SHD-204ENST00000599689 PHLDB2Q86SQ0 1253 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 TMEM199Q8N511 208 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 WHAMMQ8TF30 809 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 HDAC7Q8WUI4 952 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 KRT35Q92764 455 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 KRT12Q99456 494 aa24.46■■□□□ 1.51
SHD-204ENST00000599689 MRPL47Q9HD33 250 aaKnown RBP24.46■■□□□ 1.51
SHD-204ENST00000599689 SCN1AP35498 2009 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 M0QZ92 97 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 PEX5P50542 639 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 MYO1EQ12965 1108 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 CLUL1Q15846 466 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 C9orf50Q5SZB4 431 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 RSPH3Q86UC2 560 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 BEST2Q8NFU1 509 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 LRCH3Q96II8 777 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 RNPC3Q96LT9 517 aaKnown RBP24.45■■□□□ 1.5
SHD-204ENST00000599689 DMGDHQ9UI17 866 aaKnown RBP24.45■■□□□ 1.5
SHD-204ENST00000599689 CEP83Q9Y592 693 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 TRPV2Q9Y5S1 764 aa24.45■■□□□ 1.5
SHD-204ENST00000599689 CCDC66A2RUB6 948 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CCDC188H7C350 402 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 ZMYND10O75800 440 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CALB1P05937 261 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CD19P15391 556 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CTNNA1P35221 906 aaKnown RBP24.44■■□□□ 1.5
SHD-204ENST00000599689 EPHB4P54760 987 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 PPIGQ13427 754 aaKnown RBP eCLIP24.44■■□□□ 1.5
SHD-204ENST00000599689 MAMLD1Q13495 774 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 LLGL2Q6P1M3 1020 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CCNI2Q6ZMN8 369 aaPredicted RBP24.44■■□□□ 1.5
SHD-204ENST00000599689 TTC39CQ8N584 583 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 SLC4A11Q8NBS3 891 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 C1orf131Q8NDD1 294 aaKnown RBP24.44■■□□□ 1.5
SHD-204ENST00000599689 TSPAN18Q96SJ8 248 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 APOL6Q9BWW8 343 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 ELOVL4Q9GZR5 314 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 LHX5Q9H2C1 402 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 STIM2Q9P246 746 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 PCDHA3Q9Y5H8 950 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CDY2AQ9Y6F7 541 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 SCINQ9Y6U3 715 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 MYO1FO00160 1098 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 KRIT1O00522 736 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 FGGP02679 453 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CYP2C18P33260 490 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 SLC1A1P43005 524 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 SLC7A5Q01650 507 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 MAP9Q49MG5 647 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 SESTD1Q86VW0 696 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 FAM228AQ86W67 206 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 CPNE8Q86YQ8 564 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 WDTC1Q8N5D0 677 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 TMEM176AQ96HP8 235 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 NAP1L3Q99457 506 aaPredicted RBP24.44■■□□□ 1.5
SHD-204ENST00000599689 AP1M1Q9BXS5 423 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 FAM53CQ9NYF3 392 aa24.44■■□□□ 1.5
SHD-204ENST00000599689 AKAP5P24588 427 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 MARCKSL1P49006 195 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 MRPS25P82663 173 aaKnown RBP24.43■■□□□ 1.5
SHD-204ENST00000599689 INCA1Q0VD86 236 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 ZNF211Q13398 564 aaPredicted RBP24.43■■□□□ 1.5
SHD-204ENST00000599689 XKR4Q5GH76 650 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 KLHL7Q8IXQ5 586 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 TWNKQ96RR1 684 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 FUT8Q9BYC5 575 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 PARVAQ9NVD7 372 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 OGFRQ9NZT2 677 aa24.43■■□□□ 1.5
SHD-204ENST00000599689 TUBGCP4Q9UGJ1 667 aa24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms