RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 PLCB2Q00722 1185 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 TNK2Q07912 1038 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 LPAL2Q16609 132 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 MGAT5BQ3V5L5 792 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 TTC8Q8TAM2 541 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 BPIFB1Q8TDL5 484 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 C2orf15Q8WU43 125 aaKnown RBP17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 EPSTI1Q96J88 318 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 SEPT5Q99719 369 aaPredicted RBP17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 PYM1Q9BRP8 204 aaKnown RBP17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 USP18Q9UMW8 372 aa17.18■□□□□ 0.34
GTF2F1-203ENST00000594213 LRP3O75074 770 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 F11P03951 625 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 CNR2P34972 360 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 WNT7BP56706 349 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 VEPH1Q14D04 833 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 PON2Q15165 354 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 PTPAQ15257 358 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 LONP2Q86WA8 852 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 METTL23Q86XA0 190 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 SFR1Q86XK3 245 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 THEM5Q8N1Q8 247 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 SYNPOQ8N3V7 929 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 KRI1Q8N9T8 703 aaKnown RBP17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 CXorf38Q8TB03 319 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 SPPL2BQ8TCT7 592 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 GIPC2Q8TF65 315 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 HVCN1Q96D96 273 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 DNAJC19Q96DA6 116 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 FAM83CQ9BQN1 747 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 RTKNQ9BST9 563 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 TMLHEQ9NVH6 421 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 RAB23Q9ULC3 237 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 MYH11P35749 1972 aa17.17■□□□□ 0.34
GTF2F1-203ENST00000594213 TICRRQ7Z2Z1 1910 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 KPNA7A9QM74 516 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 KCNA1Q09470 495 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 SPEM2Q0P670 501 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 SRSF5Q13243 272 aaKnown RBP17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 SIM2Q14190 667 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 POSTNQ15063 836 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 NT5DC4Q86YG4 428 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 CMTM8Q8IZV2 173 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 ZSWIM2Q8NEG5 633 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 FAM200AQ8TCP9 573 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 CHFRQ96EP1 664 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 SMG9Q9H0W8 520 aaKnown RBP17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 GKN1Q9NS71 199 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 ZMYM5Q9UJ78 669 aa17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 CDV3Q9UKY7 258 aaKnown RBP17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 ZSCAN21Q9Y5A6 473 aaPredicted RBP17.16■□□□□ 0.34
GTF2F1-203ENST00000594213 DCDC2BA2VCK2 349 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 MYMKA6NI61 221 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 IL18RAPO95256 599 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 NLRP12P59046 1061 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 ITPRIPL2Q3MIP1 535 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 SCARA3Q6AZY7 606 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 PRR23BQ6ZRT6 265 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 DYMQ7RTS9 669 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 WDR5BQ86VZ2 330 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 DCP1BQ8IZD4 617 aaKnown RBP17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 RASSF8Q8NHQ8 419 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 RIN3Q8TB24 985 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 POMGNT1Q8WZA1 660 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 HPS4Q9NQG7 708 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 THG1LQ9NWX6 298 aaKnown RBP17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 SEL1LQ9UBV2 794 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 STK17AQ9UEE5 414 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 FBXO2Q9UK22 296 aaPredicted RBP17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 CCL26Q9Y258 94 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 CLIC4Q9Y696 253 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 DYNC1LI1Q9Y6G9 523 aaKnown RBP17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 CACNA1BQ00975 2339 aa17.15■□□□□ 0.34
GTF2F1-203ENST00000594213 SCN1AP35498 2009 aa17.14■□□□□ 0.34
GTF2F1-203ENST00000594213 OTOL1A6NHN0 477 aaPredicted RBP17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 SOBPA7XYQ1 873 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 CUL4AQ13619 759 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 SV2CQ496J9 727 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 TMEM196Q5HYL7 178 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 PKN3Q6P5Z2 889 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 C1orf127Q8N9H9 656 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 USP13Q92995 863 aaPredicted RBP17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 PKMYT1Q99640 499 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 SEMA4GQ9NTN9 838 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 ABI2Q9NYB9 513 aaPredicted RBP17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 PCDHB5Q9Y5E4 795 aa17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 SRPRBQ9Y5M8 271 aaKnown RBP17.14■□□□□ 0.33
GTF2F1-203ENST00000594213 TRDMT1O14717 391 aaKnown RBP17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 SLC30A4O14863 429 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 EXTL3O43909 919 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 DDX6P26196 483 aaKnown RBP eCLIP17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 PNPLA4P41247 253 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 GPR15P49685 360 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 RUNX3Q13761 415 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 CSRP2Q16527 193 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 L1TD1Q5T7N2 865 aaKnown RBP17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 HEATR6Q6AI08 1181 aaKnown RBP17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 FSTL4Q6MZW2 842 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 MON1AQ86VX9 555 aa17.13■□□□□ 0.33
GTF2F1-203ENST00000594213 BRSK2Q8IWQ3 736 aa17.13■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms