RNA–Protein interactions for RNA: ENST00000592822.1

TPM4-216, Transcript of tropomyosin 4, humanhuman

TSL 5

Gene TPM4, Length 262 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-216ENST00000592822 PDGFRBP09619 1106 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 SRGAP2BP0DMP2 458 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 ATP1A3P13637 1013 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 PRKCSHP14314 528 aaPredicted RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 ATF2P15336 505 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 KCNA5P22460 613 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 GNL1P36915 607 aaPredicted RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 CDR1P51861 262 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 TFF2Q03403 129 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 CETN1Q12798 172 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 LRMPQ12912 555 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 CCDC142Q17RM4 750 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 WDR44Q5JSH3 913 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 INTS6LQ5JSJ4 861 aaKnown RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 APTXQ7Z2E3 356 aaKnown RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 C12orf76Q8N812 135 aaPredicted RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 OR6B3Q8NGW1 331 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 FEZF2Q8TBJ5 459 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 HDAC7Q8WUI4 952 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 FAXDC2Q96IV6 333 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 PGLYRP2Q96PD5 576 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 ARID3AQ99856 593 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 CRACR2AQ9BSW2 395 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 VPS16Q9H269 839 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 CRISPLD1Q9H336 500 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 SNX25Q9H3E2 840 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 NDST4Q9H3R1 872 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 DPEP3Q9H4B8 488 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 PLEKHA4Q9H4M7 779 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 CYP3A43Q9HB55 503 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 TMLHEQ9NVH6 421 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 DZANK1Q9NVP4 752 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 LIMA1Q9UHB6 759 aaKnown RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 AFF4Q9UHB7 1163 aaKnown RBP10.63□□□□□ -0.71
TPM4-216ENST00000592822 COG5Q9UP83 839 aa10.63□□□□□ -0.71
TPM4-216ENST00000592822 C5orf42Q9H799 3197 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 MYBPHLA2RUH7 354 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 GTPBP10A4D1E9 387 aaKnown RBP10.62□□□□□ -0.71
TPM4-216ENST00000592822 MTMR11A4FU01 709 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 LRRC10BA6NIK2 292 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 SMTNL1A8MU46 457 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 A8MXQ7 604 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 RFPL2O75678 378 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 ZMYND10O75800 440 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 CAVIN2O95810 425 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 HOXB8P17481 243 aaPredicted RBP10.62□□□□□ -0.71
TPM4-216ENST00000592822 KCNA4P22459 653 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 PCSK1P29120 753 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 PSMC1P62191 440 aaKnown RBP10.62□□□□□ -0.71
TPM4-216ENST00000592822 TSPY1Q01534 308 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 ADCY1Q08828 1119 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 INCA1Q0VD86 236 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 CUL2Q13617 745 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 CLUL1Q15846 466 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 LEXMQ3ZCV2 418 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 SLC39A12Q504Y0 691 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 FAM171BQ6P995 826 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 LRSAM1Q6UWE0 723 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 LUZP1Q86V48 1076 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 ARHGEF19Q8IW93 802 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 TCEAL8Q8IYN2 117 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 ATAD1Q8NBU5 361 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 NT5C1BQ96P26 610 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 LPIN3Q9BQK8 851 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 SYT15Q9BQS2 421 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 APOL5Q9BWW9 433 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 S1PR5Q9H228 398 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 CRTAC1Q9NQ79 661 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 GCNT4Q9P109 453 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 THEGQ9P2T0 379 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 HMGXB4Q9UGU5 601 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 CD207Q9UJ71 328 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 GTF3C4Q9UKN8 822 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 CDH9Q9ULB4 789 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 MAFFQ9ULX9 164 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 UNC80Q8N2C7 3258 aa10.62□□□□□ -0.71
TPM4-216ENST00000592822 C2orf16Q68DN1 1984 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 PTPRDP23468 1912 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 GRXCR2A6NFK2 248 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 BECN2A8MW95 431 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 PRRG1O14668 218 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 PAPLNO95428 1278 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 C8AP07357 584 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 PTPN1P18031 435 aaKnown RBP10.61□□□□□ -0.71
TPM4-216ENST00000592822 CD58P19256 250 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 SLC9A1P19634 815 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 CDK11BP21127 795 aaKnown RBP10.61□□□□□ -0.71
TPM4-216ENST00000592822 PON1P27169 355 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 ELF1P32519 619 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 NDST1P52848 882 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 COPB1P53618 953 aaKnown RBP10.61□□□□□ -0.71
TPM4-216ENST00000592822 ZNF445P59923 1031 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 APBA1Q02410 837 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 KCNMA1Q12791 1236 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 DUSP4Q13115 394 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 ORC1Q13415 861 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 EXOC3L4Q17RC7 722 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 RARS2Q5T160 578 aaKnown RBP10.61□□□□□ -0.71
TPM4-216ENST00000592822 LIN9Q5TKA1 542 aa10.61□□□□□ -0.71
TPM4-216ENST00000592822 PHLDB3Q6NSJ2 640 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms