RNA–Protein interactions for RNA: ENST00000588860.5

SMAD4-206, Transcript of SMAD family member 4, humanhuman

TSL 4

Gene SMAD4, Length 779 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-206ENST00000588860 STIM2Q9P246 746 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 TUBGCP4Q9UGJ1 667 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 GTF2IRD1Q9UHL9 959 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 PCDHGC3Q9UN70 934 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 TRPV2Q9Y5S1 764 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 SCINQ9Y6U3 715 aa9.31□□□□□ -0.92
SMAD4-206ENST00000588860 CCDC188H7C350 402 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 ATP8B1O43520 1251 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 HEXIM1O94992 359 aaKnown RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 STAU1O95793 577 aaKnown RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 FGGP02679 453 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 ITGA4P13612 1032 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 AKAP5P24588 427 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CTNNA1P35221 906 aaKnown RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CAP1Q01518 475 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 MYO1EQ12965 1108 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 PTP4A2Q12974 167 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CLUL1Q15846 466 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 GLRA4Q5JXX5 417 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 UBXN11Q5T124 520 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 GDF6Q6KF10 455 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 DNAJC24Q6P3W2 148 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CCNI2Q6ZMN8 369 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 HDXQ7Z353 690 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 RSPH3Q86UC2 560 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 FAM228AQ86W67 206 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 SLC4A11Q8NBS3 891 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CD99L2Q8TCZ2 262 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 UBE2Q2Q8WVN8 375 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CD101Q93033 1021 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 C18orf25Q96B23 403 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 ZMAT2Q96NC0 199 aaKnown RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 TWNKQ96RR1 684 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 NAP1L3Q99457 506 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 HINFPQ9BQA5 517 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 COL25A1Q9BXS0 654 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 TRIM7Q9C029 511 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 MRPL47Q9HD33 250 aaKnown RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 OGFRQ9NZT2 677 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 KLK14Q9P0G3 267 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CNTN3Q9P232 1028 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 PARP2Q9UGN5 583 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 HMGXB4Q9UGU5 601 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 TMEM59LQ9UK28 342 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 TTC7AQ9ULT0 858 aaPredicted RBP9.3□□□□□ -0.92
SMAD4-206ENST00000588860 CDY2AQ9Y6F7 541 aa9.3□□□□□ -0.92
SMAD4-206ENST00000588860 TSC2P49815 1807 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 GOLGA6L10A0A0M3HER8 536 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 A0A0U1RQG5 324 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 CCDC66A2RUB6 948 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 MYO1FO00160 1098 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PPEF2O14830 753 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 RAD51CO43502 376 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 FKTNO75072 461 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 ADAMTS4O75173 837 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 CILPO75339 1184 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 SASH3O75995 380 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PROSCO94903 275 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 GJB6O95452 261 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 CTSHP09668 335 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 MMP8P22894 467 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 CDH5P33151 784 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 SLC1A1P43005 524 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PEX5P50542 639 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 NDST1P52848 882 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 RWDD2BP57060 319 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 NKX3-2P78367 333 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 FOXK1P85037 733 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 GUCY2DQ02846 1103 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PTPN11Q06124 597 aaPredicted RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 MAMLD1Q13495 774 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 KCNA10Q16322 511 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 CYP4A22Q5TCH4 519 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 TWF2Q6IBS0 349 aaKnown RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PLEKHA7Q6IQ23 1121 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 AADACL2Q6P093 401 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 ALKAL1Q6UXT8 129 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 ADAT2Q7Z6V5 191 aaKnown RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 ERICH1Q86X53 443 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 IFT20Q8IY31 132 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 KRT222Q8N1A0 295 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 TTC39CQ8N584 583 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 FEZF2Q8TBJ5 459 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 WHAMMQ8TF30 809 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 TMEM176AQ96HP8 235 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 HEXIM2Q96MH2 286 aaKnown RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 ZNF518BQ9C0D4 1074 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 DDX47Q9H0S4 455 aaKnown RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PLEKHA4Q9H4M7 779 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 SLITRK6Q9H5Y7 841 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 RNF19AQ9NV58 838 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PARVAQ9NVD7 372 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 SRRDQ9UH36 339 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 DMGDHQ9UI17 866 aaKnown RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 UBQLN1Q9UMX0 589 aaKnown RBP9.29□□□□□ -0.92
SMAD4-206ENST00000588860 IPPQ9Y573 584 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 PCDHA3Q9Y5H8 950 aa9.29□□□□□ -0.92
SMAD4-206ENST00000588860 GOLGA8SH3BPF8 625 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 M0QYV0 167 aa9.28□□□□□ -0.92
SMAD4-206ENST00000588860 XPOTO43592 962 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms