RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 SYCP3Q8IZU3 236 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 FZD8Q9H461 694 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 KMT5AQ9NQR1 393 aa15.56■□□□□ 0.08
CCDC43-203ENST00000588210 E7EVH7 732 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 K7ENM7 598 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 FOXN3O00409 490 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-203ENST00000588210 LRRN2O75325 713 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 MAPK6Q16659 721 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 FAM187BQ17R55 369 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 FAM109BQ6ICB4 259 aaPredicted RBP15.55■□□□□ 0.08
CCDC43-203ENST00000588210 MMS22LQ6ZRQ5 1243 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 SUGP1Q8IWZ8 645 aaKnown RBP15.55■□□□□ 0.08
CCDC43-203ENST00000588210 OTUD6BQ8N6M0 293 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 ERP44Q9BS26 406 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 TRAIPQ9BWF2 469 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 TMEM206Q9H813 350 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 ZDHHC18Q9NUE0 388 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 SEPT11Q9NVA2 429 aaKnown RBP15.55■□□□□ 0.08
CCDC43-203ENST00000588210 PIN4Q9Y237 131 aaKnown RBP15.55■□□□□ 0.08
CCDC43-203ENST00000588210 C9IYK1 514 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 TSPAN1O60635 241 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 GJB5O95377 273 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 DRG2P55039 364 aaKnown RBP15.55■□□□□ 0.08
CCDC43-203ENST00000588210 PRPF4BQ13523 1007 aaKnown RBP15.55■□□□□ 0.08
CCDC43-203ENST00000588210 AMHR2Q16671 573 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 EPC2Q52LR7 807 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 CNPY4Q8N129 248 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 SLC20A1Q8WUM9 679 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 ALG3Q92685 438 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 KIFC3Q9BVG8 833 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 CCDC113Q9H0I3 377 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 TMEM134Q9H6X4 195 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 ARHGAP28Q9P2N2 729 aa15.55■□□□□ 0.08
CCDC43-203ENST00000588210 ADGRA3Q8IWK6 1321 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 TRIOBPQ9H2D6 2365 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 GMNCA6NCL1 334 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 VGLL3A8MV65 326 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 GRXCR1A8MXD5 290 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 H0YCG3 227 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 K7ERI5 159 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 TRAPPC3O43617 180 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 PHF2O75151 1096 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 NUDT17P0C025 328 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 STAG3L1P0CL83 205 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 SCP2P22307 547 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 HOXA11P31270 313 aaPredicted RBP15.54■□□□□ 0.08
CCDC43-203ENST00000588210 FNTAP49354 379 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 FAM189BP81408 668 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 CETN1Q12798 172 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 KRT71Q3SY84 523 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 ICE2Q659A1 982 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 CRIPAKQ8N1N5 446 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 TLCD1Q96CP7 247 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 CYFIP2Q96F07 1278 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 ZBED2Q9BTP6 218 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 ELAC1Q9H777 363 aaKnown RBP15.54■□□□□ 0.08
CCDC43-203ENST00000588210 PCDHA11Q9Y5I1 949 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 TTC3P53804 2025 aa15.54■□□□□ 0.08
CCDC43-203ENST00000588210 PTPRSQ13332 1948 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 A0A0U1RQF3 1178 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 ACKR2O00590 384 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 MAPK13O15264 365 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 SLC16A4O15374 487 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 MTA2O94776 668 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 UPP2O95045 317 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 VAMP7P51809 220 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 RAB30Q15771 203 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 TWF2Q6IBS0 349 aaKnown RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 NOTUMQ6P988 496 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 C6orf89Q6UWU4 347 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 HOOK3Q86VS8 718 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 JAMLQ86YT9 394 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 NPAS4Q8IUM7 802 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 ARHGEF19Q8IW93 802 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 KCNN1Q92952 543 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 PBX4Q9BYU1 374 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 PPANQ9NQ55 473 aaKnown RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 CNOT8Q9UFF9 292 aaKnown RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 RASAL2Q9UJF2 1139 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 NOVA2Q9UNW9 492 aaKnown RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 USP20Q9Y2K6 914 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 PCDHB7Q9Y5E2 793 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 ALG6Q9Y672 507 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 LAMA2P24043 3122 aaKnown RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 C5orf60A6NFR6 353 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 TLL1O43897 1013 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 PRKCBP05771 671 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 SKIP12755 728 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 ARF4P18085 180 aaPredicted RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 CHRNA3P32297 505 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 GBP1P32455 592 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 NCKAP1LP55160 1127 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 DLG4P78352 724 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 ZNF211Q13398 564 aaPredicted RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 TMCO2Q7Z6W1 182 aaPredicted RBP15.53■□□□□ 0.08
CCDC43-203ENST00000588210 UBL4BQ8N7F7 174 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 SLC17A8Q8NDX2 589 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 TMEM161BQ8NDZ6 487 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 ACCSQ96QU6 501 aa15.53■□□□□ 0.08
CCDC43-203ENST00000588210 RPS6KC1Q96S38 1066 aa15.53■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms