RNA–Protein interactions for RNA: ENST00000585333.1

TRIM47-202, Transcript of tripartite motif containing 47, humanhuman

TSL 3

Gene TRIM47, Length 595 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM47-202ENST00000585333 NGRNQ9NPE2 291 aaKnown RBP13.77□□□□□ -0.21
TRIM47-202ENST00000585333 MRPL17Q9NRX2 175 aaKnown RBP13.77□□□□□ -0.21
TRIM47-202ENST00000585333 HESX1Q9UBX0 185 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 BACE2Q9Y5Z0 518 aa13.77□□□□□ -0.21
TRIM47-202ENST00000585333 SCN1AP35498 2009 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 TMEM265A0A087WTH1 108 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 B4GALT3O60512 393 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 LSM8O95777 96 aaKnown RBP13.76□□□□□ -0.21
TRIM47-202ENST00000585333 C1RP00736 705 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 CA3P07451 260 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 CD19P15391 556 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 ERVK-21P61565 698 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 DSG1Q02413 1049 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 CTXN3Q4LDR2 81 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 HS1BP3Q53T59 392 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 VARS2Q5ST30 1063 aaKnown RBP13.76□□□□□ -0.21
TRIM47-202ENST00000585333 C10orf76Q5T2E6 689 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 PPP2R2DQ66LE6 453 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 RNF168Q8IYW5 571 aaPredicted RBP13.76□□□□□ -0.21
TRIM47-202ENST00000585333 B3GALNT2Q8NCR0 500 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 KBTBD7Q8WVZ9 684 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 KAT5Q92993 513 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 PPP2R3CQ969Q6 453 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 HEXIM2Q96MH2 286 aaKnown RBP13.76□□□□□ -0.21
TRIM47-202ENST00000585333 SYT15Q9BQS2 421 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 MRPL45Q9BRJ2 306 aaKnown RBP13.76□□□□□ -0.21
TRIM47-202ENST00000585333 ZNF518BQ9C0D4 1074 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 CHST7Q9NS84 486 aa13.76□□□□□ -0.21
TRIM47-202ENST00000585333 NT5C1B-RDH14C9J2C7 533 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 CYP26A1O43174 497 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 ARHGAP6O43182 974 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 THAP12O43422 761 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 EFEMP2O95967 443 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 ITGB1P05556 798 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 SETSIPP0DME0 302 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 CYP11B1P15538 503 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 TNFAIP3P21580 790 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 FECHP22830 423 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 TKTP29401 623 aaKnown RBP13.75□□□□□ -0.21
TRIM47-202ENST00000585333 RAP1GAPP47736 663 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 RAD23BP54727 409 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 CDH8P55286 799 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 CDR2Q01850 454 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 APBA1Q02410 837 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 ARID5AQ03989 594 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 MAPK8IP2Q13387 824 aaPredicted RBP13.75□□□□□ -0.21
TRIM47-202ENST00000585333 MRPL58Q14197 206 aaKnown RBP13.75□□□□□ -0.21
TRIM47-202ENST00000585333 SMC1AQ14683 1233 aaKnown RBP13.75□□□□□ -0.21
TRIM47-202ENST00000585333 CNGA2Q16280 664 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 PSMD5Q16401 504 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 PTPN21Q16825 1174 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 INTS6LQ5JSJ4 861 aaKnown RBP13.75□□□□□ -0.21
TRIM47-202ENST00000585333 ARHGAP17Q68EM7 881 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 CD300LGQ6UXG3 332 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 LRRC8AQ8IWT6 810 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 VPS52Q8N1B4 723 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 KLHL23Q8NBE8 558 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 FBXO22Q8NEZ5 403 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 EPS8L1Q8TE68 723 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 RABGGTAQ92696 567 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 FUBP3Q96I24 572 aaKnown RBP eCLIP13.75□□□□□ -0.21
TRIM47-202ENST00000585333 EMILIN2Q9BXX0 1053 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 GPR62Q9BZJ7 368 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 GPR88Q9GZN0 384 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 ABCB6Q9NP58 842 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 FNIP2Q9P278 1114 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 HSFX1Q9UBD0 423 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 MTRRQ9UBK8 725 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 CACNG4Q9UBN1 327 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 DPP7Q9UHL4 492 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 PCDHGC3Q9UN70 934 aa13.75□□□□□ -0.21
TRIM47-202ENST00000585333 PTPRSQ13332 1948 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 AKR1B10O60218 316 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 CTSAP10619 480 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 PTPN1P18031 435 aaKnown RBP13.74□□□□□ -0.21
TRIM47-202ENST00000585333 CLCN1P35523 988 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 RABGGTBP53611 331 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 KRT83P78385 493 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 SPA17Q15506 151 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 PTPROQ16827 1216 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 LRIT3Q3SXY7 679 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 TPGS2Q68CL5 300 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 CHRDL2Q6WN34 429 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 RTL10Q7L3V2 364 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 IRF2BP2Q7Z5L9 587 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 SLC4A11Q8NBS3 891 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 TMEM35BQ8NCS4 154 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 MYCBPAPQ8TBZ2 947 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 SPPL2BQ8TCT7 592 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 RIN2Q8WYP3 895 aaPredicted RBP13.74□□□□□ -0.21
TRIM47-202ENST00000585333 TRIM11Q96F44 468 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 CEP295NLQ96MC4 621 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 PBX4Q9BYU1 374 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 ELOVL4Q9GZR5 314 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 SDCBP2Q9H190 292 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 LHX5Q9H2C1 402 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 TLR9Q9NR96 1032 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 IRAK3Q9Y616 596 aa13.74□□□□□ -0.21
TRIM47-202ENST00000585333 I3L4J1 428 aa13.73□□□□□ -0.21
TRIM47-202ENST00000585333 CCP110O43303 1012 aa13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.6 ms