RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 HSDL1Q3SXM5 330 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 CCDC14Q49A88 953 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 FKBP1CQ5VVH2 108 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 TTC13Q8NBP0 860 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 NETO2Q8NC67 525 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 PPFIBP2Q8ND30 876 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 HELQQ8TDG4 1101 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 AFG1LQ8WV93 481 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 FAM47DPA6NHR8 397 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 ADCY3O60266 1144 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 LPXNO60711 386 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 CFHP08603 1231 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 INSRRP14616 1297 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 PECAM1P16284 738 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 YY1P25490 414 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 RFC5P40937 340 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 SNRPFP62306 86 aaKnown RBP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 AP1B1Q10567 949 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 RAPH1Q70E73 1250 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 NIPA1Q7RTP0 329 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 SREK1Q8WXA9 508 aaKnown RBP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 CLMNQ96JQ2 1002 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 SCYL1Q96KG9 808 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 FHDC1Q9C0D6 1143 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 SIK2Q9H0K1 926 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 CTSHP09668 335 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 STAG3L1P0CL83 205 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 CREB1P16220 341 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 RFC1P35251 1148 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 SKOR1P84550 965 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 PSMD6Q15008 389 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 TREML2Q5T2D2 321 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 DCAF12L1Q5VU92 463 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 EEF1DP3Q658K8 133 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 LVRNQ6Q4G3 990 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 PDCD7Q8N8D1 485 aaKnown RBP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 N4BP2L2Q92802 583 aaPredicted RBP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 KLC2Q9H0B6 622 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.54□□□□□ -0.4
ERBB2-218ENST00000584450 ZMYM2Q9UBW7 1377 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 TOGARAM1Q9Y4F4 1720 aa12.54□□□□□ -0.4
ERBB2-218ENST00000584450 SPDYE16A6NNV3 312 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-218ENST00000584450 TXNDC9O14530 226 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 DHX15O43143 795 aaKnown RBP12.53□□□□□ -0.4
ERBB2-218ENST00000584450 CHRNB2P17787 502 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 PEX19P40855 299 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 CAPSQ13938 189 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 MUM1Q2TAK8 710 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 ZACNQ401N2 412 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 RWDD4Q6NW29 188 aaKnown RBP12.53□□□□□ -0.4
ERBB2-218ENST00000584450 ZNF677Q86XU0 584 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 FAM167BQ9BTA0 163 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 CEP41Q9BYV8 373 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 XPNPEP1Q9NQW7 623 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 HES2Q9Y543 173 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 IQANK1A0A1B0GTG1 560 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 UBOX5O94941 541 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 ESRRAP11474 423 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-218ENST00000584450 ARPP19P56211 112 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 MAMLD1Q13495 774 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 TFDP3Q5H9I0 405 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 FOXR2Q6PJQ5 311 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 SPOCD1Q6ZMY3 1216 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 EXOC8Q8IYI6 725 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 KIRREL3Q8IZU9 778 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 FAM129AQ9BZQ8 928 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 VPS11Q9H270 941 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 UBN1Q9NPG3 1134 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 DDX56Q9NY93 547 aaKnown RBP12.53□□□□□ -0.4
ERBB2-218ENST00000584450 ERAP1Q9NZ08 941 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 CES2O00748 559 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 CIB2O75838 187 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 SLC8A1P32418 973 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 PPP1R2P3Q6NXS1 205 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 DENND1BQ6P3S1 775 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 CYTH2Q99418 400 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 PORCNQ9H237 461 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 NINJ2Q9NZG7 142 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 KLHL8Q9P2G9 620 aaPredicted RBP12.53□□□□□ -0.4
ERBB2-218ENST00000584450 ZNF536O15090 1300 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 ADGRA3Q8IWK6 1321 aa12.53□□□□□ -0.4
ERBB2-218ENST00000584450 CACNA1SQ13698 1873 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 TRAPPC3O43617 180 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 TBC1D12O60347 775 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 HUS1O60921 280 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 KRT37O76014 449 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 SLC4A1P02730 911 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 SCTRP47872 440 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 CPA2P48052 419 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 MMP14P50281 582 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 NCKAP1LP55160 1127 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 FSTL1Q12841 308 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 METTL7BQ6UX53 244 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 DSTYKQ6XUX3 929 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 TEX2Q8IWB9 1127 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 PPP1R36Q96LQ0 422 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 TTC25Q96NG3 672 aa12.52□□□□□ -0.4
ERBB2-218ENST00000584450 RAB3IPQ96QF0 476 aaPredicted RBP12.52□□□□□ -0.4
ERBB2-218ENST00000584450 ARL2BPQ9Y2Y0 163 aa12.52□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms