RNA–Protein interactions for RNA: ENST00000582092.1

SS18-220, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 1 (best)

Gene SS18, Length 215 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-220ENST00000582092 CDHR5Q9HBB8 845 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 OSGEPQ9NPF4 335 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ACP6Q9NPH0 428 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 UBQLN1Q9UMX0 589 aaKnown RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 POLIQ9UNA4 740 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 PACSIN2Q9UNF0 486 aaPredicted RBP9.87□□□□□ -0.83
SS18-220ENST00000582092 CNTN6Q9UQ52 1028 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 STXBP5LQ9Y2K9 1186 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 CDY2AQ9Y6F7 541 aa9.87□□□□□ -0.83
SS18-220ENST00000582092 ABHD14A-ACY1A0A1B0GW23 586 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 TARSL2A2RTX5 802 aaKnown RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 PGRMC1O00264 195 aaKnown RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 DESP17661 470 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 HOXA11P31270 313 aaPredicted RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 PNPLA4P41247 253 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 ADAM17P78536 824 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 TAP1Q03518 808 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 GPS2Q13227 327 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 TCEAL1Q15170 157 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 PPP2R5EQ16537 467 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 PTPROQ16827 1216 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 LONRF2Q1L5Z9 754 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 SGO2Q562F6 1265 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 ZNF618Q5T7W0 954 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 C8orf74Q6P047 294 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 Q7L0L9 218 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 MICAL3Q7RTP6 2002 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 SLFN11Q7Z7L1 901 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 NT5DC3Q86UY8 548 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 MMGT1Q8N4V1 131 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 C1orf127Q8N9H9 656 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 LRRC57Q8N9N7 239 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 SPATA4Q8NEY3 305 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 CCDC26Q8TAB7 109 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 GADD45GIP1Q8TAE8 222 aaPredicted RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 DDX1Q92499 740 aaKnown RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 ZNF560Q96MR9 790 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 FAM161BQ96MY7 647 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 GAS2L1Q99501 681 aaPredicted RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 SNX25Q9H3E2 840 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 ZNF576Q9H609 170 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 AVENQ9NQS1 362 aaPredicted RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 CHST12Q9NRB3 414 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 PARVAQ9NVD7 372 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 ANAPC7Q9UJX3 599 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 KIAA1257Q9ULG3 409 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 STRIP2Q9ULQ0 834 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 PCDHA11Q9Y5I1 949 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.86□□□□□ -0.83
SS18-220ENST00000582092 ALG6Q9Y672 507 aa9.86□□□□□ -0.83
SS18-220ENST00000582092 RANBP2P49792 3224 aaKnown RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 CCDC66A2RUB6 948 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 CCDC151A5D8V7 595 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 CCDC188H7C350 402 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 KRIT1O00522 736 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 RECQL4O94761 1208 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 MTA2O94776 668 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 CALCAP01258 141 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 CYP1A1P04798 512 aaPredicted RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 VDRP11473 427 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 UNGP13051 313 aaPredicted RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 ITGA4P13612 1032 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 BRD2P25440 801 aaKnown RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 HOXC8P31273 242 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 SSTR3P32745 418 aaPredicted RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 SLC1A1P43005 524 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 CENPCQ03188 943 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 C1QBPQ07021 282 aaKnown RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 STILQ15468 1287 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 DNAJC24Q6P3W2 148 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 DCUN1D2Q6PH85 259 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 FBXO38Q6PIJ6 1188 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 MMS22LQ6ZRQ5 1243 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 DPH6Q7L8W6 267 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 PALB2Q86YC2 1186 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 PHF13Q86YI8 300 aaPredicted RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 IFT20Q8IY31 132 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 ACTRT1Q8TDG2 376 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 IPO4Q8TEX9 1081 aaKnown RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 MAIP1Q8WWC4 291 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 SEPT8Q92599 483 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 RUBCNQ92622 972 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 APBB2Q92870 758 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 TMEM176AQ96HP8 235 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 MS4A14Q96JA4 679 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 SNX27Q96L92 541 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 C11orf70Q9BRQ4 267 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 ZBED2Q9BTP6 218 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 NT5C1AQ9BXI3 368 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 EIF2AQ9BY44 585 aaKnown RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 PBX4Q9BYU1 374 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 SLC38A7Q9NVC3 462 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 RNF216Q9NWF9 866 aaPredicted RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 CXXC1Q9P0U4 656 aaPredicted RBP9.85□□□□□ -0.83
SS18-220ENST00000582092 MTUS1Q9ULD2 1270 aa9.85□□□□□ -0.83
SS18-220ENST00000582092 ATMINO43313 823 aaPredicted RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 ATP8B1O43520 1251 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 HUS1O60921 280 aa9.84□□□□□ -0.83
SS18-220ENST00000582092 STAU1O95793 577 aaKnown RBP9.84□□□□□ -0.83
SS18-220ENST00000582092 CXCL10P02778 98 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms