RNA–Protein interactions for RNA: ENST00000580713.1

TOP3A-210, Transcript of DNA topoisomerase III alpha, humanhuman

TSL 2

Gene TOP3A, Length 474 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3A-210ENST00000580713 FGF19O95750 216 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 OR4Q2P0C623 313 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 PRKCSHP14314 528 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 U2AF2P26368 475 aaKnown RBP eCLIP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 RDXP35241 583 aaKnown RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 GRM5P41594 1212 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 TXKP42681 527 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 EFNA5P52803 228 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 IRX4P78413 519 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 CYP4F8P98187 520 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 AMPD2Q01433 879 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 YWHAHQ04917 246 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 PSMD2Q13200 908 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 RUNX3Q13761 415 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 SOWAHCQ53LP3 525 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 CLEC17AQ6ZS10 378 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 GAREM2Q75VX8 874 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 DNAJB7Q7Z6W7 309 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 RPLP0P6Q8NHW5 317 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 PIGKQ92643 395 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 C18orf25Q96B23 403 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 ZMAT2Q96NC0 199 aaKnown RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 GCNAQ96QF7 691 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 NACC1Q96RE7 527 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 MKNK1Q9BUB5 465 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 SMG9Q9H0W8 520 aaKnown RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 POLD4Q9HCU8 107 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 SLC27A5Q9Y2P5 690 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 ASB3Q9Y575 518 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 TIMM13Q9Y5L4 95 aaPredicted RBP11.68□□□□□ -0.54
TOP3A-210ENST00000580713 TRIP11Q15643 1979 aa11.68□□□□□ -0.54
TOP3A-210ENST00000580713 DMXL2Q8TDJ6 3036 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 SPAARA0A1B0GVQ0 90 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 ARHGEF35A5YM69 484 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 K7ERI5 159 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 TRDMT1O14717 391 aaKnown RBP11.67□□□□□ -0.54
TOP3A-210ENST00000580713 DRD1P21728 446 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 MAPK8P45983 427 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 DHPSP49366 369 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-210ENST00000580713 SIM1P81133 766 aaPredicted RBP11.67□□□□□ -0.54
TOP3A-210ENST00000580713 DMC1Q14565 340 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 ZNF568Q3ZCX4 644 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 USP39Q53GS9 565 aaKnown RBP11.67□□□□□ -0.54
TOP3A-210ENST00000580713 PMS2CLQ68D20 193 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 TRIM68Q6AZZ1 485 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 ALKAL1Q6UXT8 129 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 USP37Q86T82 979 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 PDZD3Q86UT5 571 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 ITIH5Q86UX2 942 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 C11orf74Q86VG3 221 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 EXOC4Q96A65 974 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 ACAP3Q96P50 834 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 TCHPQ9BT92 498 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 TPSD1Q9BZJ3 242 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 CDT1Q9H211 546 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 CRISPLD1Q9H336 500 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 EBF3Q9H4W6 596 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 TASP1Q9H6P5 420 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 TNFSF13BQ9Y275 285 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 NBEAQ8NFP9 2946 aa11.67□□□□□ -0.54
TOP3A-210ENST00000580713 ABCA7Q8IZY2 2146 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 FLNBO75369 2602 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 MEFVO15553 781 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 SOAT2O75908 522 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 VNN2O95498 520 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 HARSP12081 509 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 KCNE1P15382 129 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 CYP11B2P19099 503 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 GALK1P51570 392 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 KRT85P78386 507 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 DNM1Q05193 864 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 NR5A1Q13285 461 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 TAF12Q16514 161 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 FBXO43Q4G163 708 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 XKR4Q5GH76 650 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 EARS2Q5JPH6 523 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 FAM173BQ6P4H8 233 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 PADI6Q6TGC4 694 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 SYT13Q7L8C5 426 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 ATAD1Q8NBU5 361 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 BEST2Q8NFU1 509 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 TSTD1Q8NFU3 115 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 PSMG2Q969U7 264 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 ACDQ96AP0 544 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 CHFRQ96EP1 664 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 ZNF396Q96N95 335 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 P2RY13Q9BPV8 354 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 NUSAP1Q9BXS6 441 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 FBRSL1Q9HCM7 1045 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 HPS4Q9NQG7 708 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 EBF1Q9UH73 591 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 EML5Q05BV3 1969 aa11.66□□□□□ -0.54
TOP3A-210ENST00000580713 GCN1Q92616 2671 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 ASCC3Q8N3C0 2202 aaKnown RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 KIF26AQ9ULI4 1882 aaPredicted RBP11.66□□□□□ -0.54
TOP3A-210ENST00000580713 OR6C75A6NL08 312 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 GOLGA6L22H0YM25 854 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 SPATA31C1P0DKV0 1188 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 ARSAP15289 507 aa11.65□□□□□ -0.54
TOP3A-210ENST00000580713 CDC25CP30307 473 aa11.65□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms