RNA–Protein interactions for RNA: ENST00000580446.1

CSNK1D-213, Transcript of casein kinase 1 delta, humanhuman

TSL 3

Gene CSNK1D, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-213ENST00000580446 PRMT7Q9NVM4 692 aaPredicted RBP15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 DDX25Q9UHL0 483 aaKnown RBP15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 PPME1Q9Y570 386 aa15.4■□□□□ 0.06
CSNK1D-213ENST00000580446 MUC22E2RYF6 1773 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 ARID2Q68CP9 1835 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 TCRBV21S2A2A0A5A6 115 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 SLC27A2O14975 620 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 KLF8O95600 359 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 CXADRP78310 365 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 POU5F1BQ06416 359 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 ZNF33AQ06730 810 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 MESP2Q0VG99 397 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 PPP2R5CQ13362 524 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 HDAC1Q13547 482 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 COLEC12Q5KU26 742 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 TXNDC8Q6A555 127 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 LRRC69Q6ZNQ3 347 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 SLC41A1Q8IVJ1 513 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 CPA6Q8N4T0 437 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 BEST2Q8NFU1 509 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 BSNDQ8WZ55 320 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 SEPT5Q99719 369 aaPredicted RBP15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 KIFC3Q9BVG8 833 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 NFKBIZQ9BYH8 718 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 FZD8Q9H461 694 aa15.39■□□□□ 0.05
CSNK1D-213ENST00000580446 NUP210Q8TEM1 1887 aaPredicted RBP15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 SGSM2O43147 1006 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 DKC1O60832 514 aaKnown RBP eCLIP15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 ALDH1A2O94788 518 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 SYPP08247 313 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 MAOBP27338 520 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 TIE1P35590 1138 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 AVPR1AP37288 418 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 AMPD2Q01433 879 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 GRIK2Q13002 908 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 EMC10Q5UCC4 262 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 CENPPQ6IPU0 288 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 CCDC12Q8WUD4 166 aaPredicted RBP15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 SUSD3Q96L08 255 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 HSPA12BQ96MM6 686 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 GCNAQ96QF7 691 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 ADPGKQ9BRR6 497 aa15.38■□□□□ 0.05
CSNK1D-213ENST00000580446 CYP3A7-CYP3A51PA0A087WV96 503 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 MTMR11A4FU01 709 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 MARCH6O60337 910 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 ATF6P18850 670 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 CYP3A7P24462 503 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 SLC14A1Q13336 389 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 LMBRD2Q68DH5 695 aaPredicted RBP15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 GLRX5Q86SX6 157 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 TMEM150AQ86TG1 271 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 TRIML1Q8N9V2 468 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 BICD2Q8TD16 824 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 SPIRE2Q8WWL2 714 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 RUFY2Q8WXA3 655 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 POLD4Q9HCU8 107 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 DUS2Q9NX74 493 aaKnown RBP15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 BTBD3Q9Y2F9 522 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 PI4KAP42356 2102 aa15.37■□□□□ 0.05
CSNK1D-213ENST00000580446 GOLGA4Q13439 2230 aaKnown RBP15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 KIAA1549LQ6ZVL6 1849 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 MYO16Q9Y6X6 1858 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 AP5Z1O43299 807 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 LARGE1O95461 756 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 MARCKSP29966 332 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 WEE1P30291 646 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 HOXD12P35452 270 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 MYO1EQ12965 1108 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 MTF1Q14872 753 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 PDGFRLQ15198 375 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 EPHA7Q15375 998 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 CDCA2Q69YH5 1023 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 DHRS13Q6UX07 377 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 ZBTB8OSQ8IWT0 167 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 RGL4Q8IZJ4 473 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 APPL2Q8NEU8 664 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 PIGOQ8TEQ8 1089 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 PRIMPOLQ96LW4 560 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 ACAP3Q96P50 834 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 LINC00597Q9H2U6 94 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 ZSWIM4Q9H7M6 989 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 CD93Q9NPY3 652 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 TDP1Q9NUW8 608 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 KIAA1522Q9P206 1035 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 TUBGCP4Q9UGJ1 667 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 MAFFQ9ULX9 164 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 PCDHB8Q9UN66 801 aa15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 UBR5O95071 2799 aaPredicted RBP15.36■□□□□ 0.05
CSNK1D-213ENST00000580446 TEX51A0A1B0GUA7 166 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 B8ZZF3 427 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 HLA-EP13747 358 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 OPRD1P41143 372 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 NLRP5P59047 1200 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 NUCB1Q02818 461 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 YWHAHQ04917 246 aaPredicted RBP15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 CCDC173Q0VFZ6 552 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 INF2Q27J81 1249 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 NT5DC1Q5TFE4 455 aa15.35■□□□□ 0.05
CSNK1D-213ENST00000580446 CREB3L3Q68CJ9 461 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms