RNA–Protein interactions for RNA: ENST00000578519.5

SKA2-204, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

TSL 3

Gene SKA2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-204ENST00000578519 CFAP58Q5T655 872 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 RUFY4Q6ZNE9 571 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 CEP128Q6ZU80 1094 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 DPH6Q7L8W6 267 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 SESTD1Q86VW0 696 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 KATNAL2Q8IYT4 538 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 C1orf131Q8NDD1 294 aaKnown RBP11.78□□□□□ -0.52
SKA2-204ENST00000578519 FNIP1Q8TF40 1166 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 ELMO3Q96BJ8 720 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 PCYOX1Q9UHG3 505 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 GTF2IRD1Q9UHL9 959 aa11.78□□□□□ -0.52
SKA2-204ENST00000578519 ZSWIM8A7E2V4 1837 aa11.77□□□□□ -0.52
SKA2-204ENST00000578519 ARHGEF37A1IGU5 675 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 GOLGA6BA6NDN3 693 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 RPS6KA5O75582 802 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 ZMYND10O75800 440 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 RNF8O76064 485 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 PYGMP11217 842 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 KRT3P12035 628 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 FGFR4P22455 802 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 TAF6P49848 677 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 RAB27AP51159 221 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 SLC8A3P57103 927 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 PSMC1P62191 440 aaKnown RBP11.77□□□□□ -0.53
SKA2-204ENST00000578519 ZNF211Q13398 564 aaPredicted RBP11.77□□□□□ -0.53
SKA2-204ENST00000578519 ZBTB6Q15916 424 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 CYP1B1Q16678 543 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 DEFB115Q30KQ5 88 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 NBPF20Q3BBV1 942 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 FAM47CQ5HY64 1035 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 SPDYCQ5MJ68 293 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 TWF2Q6IBS0 349 aaKnown RBP11.77□□□□□ -0.53
SKA2-204ENST00000578519 LCLAT1Q6UWP7 414 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 ALKAL1Q6UXT8 129 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 CROCCP2Q86T23 111 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 RNF180Q86T96 592 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 ZDHHC17Q8IUH5 632 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 CCDC50Q8IVM0 306 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 CCDC105Q8IYK2 499 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 MREGQ8N565 214 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 NIPA2Q8N8Q9 360 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 SLC4A11Q8NBS3 891 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 BBOF1Q8ND07 529 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 CCHCR1Q8TD31 782 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 ALG3Q92685 438 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 FAM84AQ96KN4 292 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 TNIP3Q96KP6 325 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 ERP44Q9BS26 406 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 FRMD8P1Q9BZ68 369 aaPredicted RBP11.77□□□□□ -0.53
SKA2-204ENST00000578519 DDX47Q9H0S4 455 aaKnown RBP11.77□□□□□ -0.53
SKA2-204ENST00000578519 SNX25Q9H3E2 840 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 UBN1Q9NPG3 1134 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 XPNPEP3Q9NQH7 507 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 ASNSD1Q9NWL6 643 aa11.77□□□□□ -0.53
SKA2-204ENST00000578519 MTRF1LQ9UGC7 380 aaKnown RBP11.77□□□□□ -0.53
SKA2-204ENST00000578519 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.77□□□□□ -0.53
SKA2-204ENST00000578519 GOLGA6L10A6NI86 522 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 A6NNZ2 444 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 GOLGA8KD6RF30 607 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 HUS1O60921 280 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 CAND2O75155 1236 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 RECQL4O94761 1208 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 TOMM70O94826 608 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 MICAL2O94851 1124 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 TJP3O95049 919 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 GAS8O95995 478 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 GLI1P08151 1106 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 ITGA4P13612 1032 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 CST5P28325 142 aaPredicted RBP11.76□□□□□ -0.53
SKA2-204ENST00000578519 ACADSBP45954 432 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 GABRB2P47870 512 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 AARSP49588 968 aaKnown RBP eCLIP11.76□□□□□ -0.53
SKA2-204ENST00000578519 NDST1P52848 882 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 CDH8P55286 799 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 PRMT2P55345 433 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 CAV1Q03135 178 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 TUBB8Q3ZCM7 444 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 XKR4Q5GH76 650 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 FBXO47Q5MNV8 452 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 C9orf57Q5W0N0 161 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 DENND1BQ6P3S1 775 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 POLNQ7Z5Q5 900 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 C12orf50Q8NA57 414 aaPredicted RBP11.76□□□□□ -0.53
SKA2-204ENST00000578519 CXorf38Q8TB03 319 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 STK32AQ8WU08 396 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 HDAC7Q8WUI4 952 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 KRT35Q92764 455 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 PGBD4Q96DM1 585 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 BTBD6Q96KE9 485 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 APOL6Q9BWW8 343 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 CFHR5Q9BXR6 569 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 EIF2AQ9BY44 585 aaKnown RBP11.76□□□□□ -0.53
SKA2-204ENST00000578519 SEZ6LQ9BYH1 1024 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 LRRC19Q9H756 370 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 SMYD3Q9H7B4 428 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 CYLDQ9NQC7 956 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 GDAP2Q9NXN4 497 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 AMACRQ9UHK6 382 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 HPCAL4Q9UM19 191 aa11.76□□□□□ -0.53
SKA2-204ENST00000578519 NFU1Q9UMS0 254 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms