RNA–Protein interactions for RNA: ENST00000578194.5

CSNK1D-207, Transcript of casein kinase 1 delta, humanhuman

TSL 4

Gene CSNK1D, Length 567 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-207ENST00000578194 OSTM1Q86WC4 334 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 FBXL13Q8NEE6 735 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 SPPL2BQ8TCT7 592 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 TAS1R2Q8TE23 839 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 KBTBD7Q8WVZ9 684 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 ZNF707Q96C28 371 aaPredicted RBP13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 DNAI2Q9GZS0 605 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 POMKQ9H5K3 350 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 CDH9Q9ULB4 789 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 POLIQ9UNA4 740 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 NR2E1Q9Y466 385 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 PCDHB5Q9Y5E4 795 aa13.58□□□□□ -0.24
CSNK1D-207ENST00000578194 CCL16O15467 120 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 TRIM21P19474 475 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 ACAT1P24752 427 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 SSTR3P32745 418 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 GNL1P36915 607 aaPredicted RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 ALDH1A3P47895 512 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 TUFMP49411 452 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 MARSP56192 900 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 NOP14P78316 857 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 ZP2Q05996 745 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 CETN1Q12798 172 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 MAPRE1Q15691 268 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 WDR44Q5JSH3 913 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 FAM114A1Q8IWE2 563 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 OR6B3Q8NGW1 331 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 SLC35C1Q96A29 364 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 TMEM209Q96SK2 561 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 SYT15Q9BQS2 421 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 MRPL45Q9BRJ2 306 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 WDR6Q9NNW5 1121 aaKnown RBP13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 ANO10Q9NW15 660 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 YIPF1Q9Y548 306 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 CLUHO75153 1309 aa13.57□□□□□ -0.24
CSNK1D-207ENST00000578194 FMO5P49326 533 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 EPHB3P54753 998 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 DUSP4Q13115 394 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 STX1AQ16623 288 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 IQCEQ6IPM2 695 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 SCARA5Q6ZMJ2 495 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 C4orf50Q6ZRC1 276 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 OTOP3Q7RTS5 596 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 SPATA2LQ8IUW3 424 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 TRIM59Q8IWR1 403 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 TDRD5Q8NAT2 981 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 ATAD1Q8NBU5 361 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 ACSF2Q96CM8 615 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 FAXDC2Q96IV6 333 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 RPGRIP1Q96KN7 1286 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 CNOT6LQ96LI5 555 aaKnown RBP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 ZNF512Q96ME7 567 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 PI4K2AQ9BTU6 479 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 NIF3L1Q9GZT8 377 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 THAP9Q9H5L6 903 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 SMYD3Q9H7B4 428 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 CYP3A43Q9HB55 503 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 ABCB6Q9NP58 842 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 RAB20Q9NX57 234 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 ABI2Q9NYB9 513 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 MAGEC2Q9UBF1 373 aaPredicted RBP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 CDH22Q9UJ99 828 aa13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.56□□□□□ -0.24
CSNK1D-207ENST00000578194 PTPRDP23468 1912 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 C19orf67A6NJJ6 358 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 A8MXQ7 604 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 PMM2O15305 246 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 P4HA2O15460 535 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 VNN2O95498 520 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 AFPP02771 609 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 PDGFRBP09619 1106 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 HAPLN1P10915 354 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 PTPN2P17706 415 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 RPL10AP62906 217 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 TWF1Q12792 350 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 VEPH1Q14D04 833 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 KLHL40Q2TBA0 621 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 MGAT5BQ3V5L5 792 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 CBWD6Q4V339 395 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 CBWD3Q5JTY5 395 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 CBWD5Q5RIA9 395 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 SPOPLQ6IQ16 392 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 CAVIN1Q6NZI2 390 aaKnown RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 GRASPQ7Z6J2 395 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 ITIH5Q86UX2 942 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 LRRTM3Q86VH5 581 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 CREBRFQ8IUR6 639 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 GJD3Q8N144 294 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 TTC39CQ8N584 583 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 LEMD2Q8NC56 503 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 FUBP3Q96I24 572 aaKnown RBP eCLIP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 TNIP3Q96KP6 325 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 NECAB3Q96P71 396 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 SEPT5Q99719 369 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 COL25A1Q9BXS0 654 aaPredicted RBP13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 BCO2Q9BYV7 579 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 TMEM63CQ9P1W3 806 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 GTF3C4Q9UKN8 822 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 USTQ9Y2C2 406 aa13.55□□□□□ -0.24
CSNK1D-207ENST00000578194 SLC27A5Q9Y2P5 690 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms