RNA–Protein interactions for RNA: ENST00000576033.5

CCDC40-215, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 466 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-215ENST00000576033 FMO5P49326 533 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 KLK7P49862 253 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 MYL5Q02045 173 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ADCY1Q08828 1119 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ELAVL2Q12926 359 aaKnown RBP8.47□□□□□ -1.05
CCDC40-215ENST00000576033 TRPC3Q13507 836 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 SURF1Q15526 300 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 MIIPQ5JXC2 388 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 SLC8B1Q6J4K2 584 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 PDE12Q6L8Q7 609 aaKnown RBP8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ANKS3Q6ZW76 656 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 LIMS2Q7Z4I7 341 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 FILIP1Q7Z7B0 1213 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 SMRP1Q8NCR6 262 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ENOX1Q8TC92 643 aaKnown RBP8.47□□□□□ -1.05
CCDC40-215ENST00000576033 CEP63Q96MT8 703 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 CRACR2AQ9BSW2 395 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 MKNK1Q9BUB5 465 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 ZCWPW1Q9H0M4 648 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 POMKQ9H5K3 350 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 GDAP2Q9NXN4 497 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 TAB2Q9NYJ8 693 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 FNIP2Q9P278 1114 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 CD207Q9UJ71 328 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 NFE2L3Q9Y4A8 694 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 BACE2Q9Y5Z0 518 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 DOCK8Q8NF50 2099 aa8.47□□□□□ -1.05
CCDC40-215ENST00000576033 TTC28Q96AY4 2481 aa8.46□□□□□ -1.05
CCDC40-215ENST00000576033 FAM170AA1A519 330 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 SPDYE4A6NLX3 237 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 GOLGA6L19H0YKK7 550 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 CLDN5O00501 218 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 N4BP1O75113 896 aaKnown RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 OAZ2O95190 189 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 PNMA6AP0CW24 399 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 ATP1A3P13637 1013 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 CCDC130P13994 396 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 ATF6P18850 670 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 SSTR3P32745 418 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 TNNC1P63316 161 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 KCNH2Q12809 1159 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 MYO1EQ12965 1108 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 DUSP4Q13115 394 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 RAB33AQ14088 237 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 TPD52L1Q16890 204 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 MDH1BQ5I0G3 518 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 KRT39Q6A163 491 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 PTCRAQ6ISU1 281 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 FRMD5Q7Z6J6 570 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 USP37Q86T82 979 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 ZSCAN30Q86W11 494 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 HS6ST3Q8IZP7 471 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 APPL2Q8NEU8 664 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 CASP10Q92851 521 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 MYLPFQ96A32 169 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 TSPAN18Q96SJ8 248 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 CDCA3Q99618 268 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 SEPT5Q99719 369 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 SYT15Q9BQS2 421 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 CYP4F11Q9HBI6 524 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 CD320Q9NPF0 282 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 FANCLQ9NW38 375 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 ABI2Q9NYB9 513 aaPredicted RBP8.46□□□□□ -1.06
CCDC40-215ENST00000576033 DACH1Q9UI36 760 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 GTF3C4Q9UKN8 822 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 YIPF1Q9Y548 306 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 MYH10P35580 1976 aa8.46□□□□□ -1.06
CCDC40-215ENST00000576033 DENND4CQ5VZ89 1909 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ZNF638Q14966 1978 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 CCDC195A0A1B0GUA6 201 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 BECN2A8MW95 431 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ESPNB1AK53 854 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 KCNJ18B7U540 433 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 GABRDO14764 452 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 HUS1O60921 280 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ABLIM3O94929 683 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 AFPP02771 609 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 GJA1P17302 382 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 WARSP23381 471 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 PPP1R2P41236 205 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 PNPLA4P41247 253 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 CCR2P41597 374 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 MTIF2P46199 727 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 NDST1P52848 882 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 MARSP56192 900 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 MCCD1P59942 119 aaPredicted RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 TWF1Q12792 350 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 SMAD4Q13485 552 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 MTMR3Q13615 1198 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 KCNJ12Q14500 433 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 KRT31Q15323 416 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 SLC5A9Q2M3M2 681 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 LEXMQ3ZCV2 418 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ZNF394Q53GI3 561 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 ZNF667Q5HYK9 610 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 INTS6LQ5JSJ4 861 aaKnown RBP8.45□□□□□ -1.06
CCDC40-215ENST00000576033 CDKAL1Q5VV42 579 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 TMEM184AQ6ZMB5 413 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 RRAGAQ7L523 313 aa8.45□□□□□ -1.06
CCDC40-215ENST00000576033 GRASPQ7Z6J2 395 aaPredicted RBP8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms