RNA–Protein interactions for RNA: ENST00000575560.5

CALCOCO2-227, Transcript of calcium binding and coiled-coil domain 2, humanhuman

TSL 5

Gene CALCOCO2, Length 540 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALCOCO2-227ENST00000575560 NUP210Q8TEM1 1887 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 C1QTNF9BB2RNN3 333 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 PIRO00625 290 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 XPOTO43592 962 aaKnown RBP10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 RNF40O75150 1001 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 EGFP01133 1207 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 C1QTNF9P0C862 333 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 ODC1P11926 461 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 DRD1P21728 446 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 NEK4P51957 841 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 PPP2R3AQ06190 1150 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 KYAT1Q16773 422 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 SLC39A12Q504Y0 691 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 KRT79Q5XKE5 535 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 TRIM68Q6AZZ1 485 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 UNQ6494/PRO21346Q6UXR6 183 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 SYT2Q8N9I0 419 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 USP13Q92995 863 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 TMEM121BQ9BXQ6 578 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 RAB34Q9BZG1 259 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 ZCWPW1Q9H0M4 648 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 EBF3Q9H4W6 596 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 SH2B1Q9NRF2 756 aaPredicted RBP10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 EBF1Q9UH73 591 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 ZMIZ1Q9ULJ6 1067 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 TBX20Q9UMR3 447 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 CCL26Q9Y258 94 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 ZFYVE26Q68DK2 2539 aa10.81□□□□□ -0.68
CALCOCO2-227ENST00000575560 FREM2Q5SZK8 3169 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 ANO9A1A5B4 782 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 BCLAF3A2AJT9 711 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 C4orf47A7E2U8 309 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 SOBPA7XYQ1 873 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 GIPC1O14908 333 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 DCLK1O15075 740 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 RHOBTB1O94844 696 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 CAVIN2O95810 425 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 F11P03951 625 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 HMGA1P17096 107 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 U2AF2P26368 475 aaKnown RBP eCLIP10.8□□□□□ -0.689e-10■■■■■ 26.8
CALCOCO2-227ENST00000575560 PRPHP41219 470 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 NCKAP1LP55160 1127 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 NLRP12P59046 1061 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 AMPD2Q01433 879 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 RAD51AP2Q09MP3 1159 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 VEPH1Q14D04 833 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 MGAT5BQ3V5L5 792 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 FBXO43Q4G163 708 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 HYIQ5T013 277 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 C9orf57Q5W0N0 161 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 SYT13Q7L8C5 426 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 LRRTM3Q86VH5 581 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 KCTD17Q8N5Z5 321 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 MAB21L3Q8N8X9 362 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 RIN3Q8TB24 985 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 GIPC2Q8TF65 315 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 C2orf15Q8WU43 125 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 EZH1Q92800 747 aaPredicted RBP10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 HHIPQ96QV1 700 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 SEPT5Q99719 369 aaPredicted RBP10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 EDEM2Q9BV94 578 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 TDP1Q9NUW8 608 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 NOL7Q9UMY1 257 aaKnown RBP10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 PCDHB6Q9Y5E3 794 aa10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 KIF26AQ9ULI4 1882 aaPredicted RBP10.8□□□□□ -0.68
CALCOCO2-227ENST00000575560 IGF2RP11717 2491 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 A0A0B4J269 797 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 LNP1A1A4G5 178 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 LAD1O00515 517 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 OGTO15294 1046 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 PIGRP01833 764 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 HAPLN1P10915 354 aaPredicted RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 ARSAP15289 507 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 DDX6P26196 483 aaKnown RBP eCLIP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 NMT1P30419 496 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 GJA4P35212 333 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 AVPR1AP37288 418 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 MATR3P43243 847 aaKnown RBP eCLIP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 NOVA1P51513 510 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 CDR1P51861 262 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 SLC12A3P55017 1021 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 CREB5Q02930 508 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 SMARCB1Q12824 385 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 COL9A2Q14055 689 aaPredicted RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 ZNF268Q14587 947 aaPredicted RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 KARSQ15046 597 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 ELF2Q15723 593 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 ARSHQ5FYA8 562 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 NAIF1Q69YI7 327 aaPredicted RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 JADE1Q6IE81 842 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 DTHD1Q6ZMT9 781 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 MON1AQ86VX9 555 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 CD302Q8IX05 232 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 SPDYE1Q8NFV5 336 aaPredicted RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 SPPL2BQ8TCT7 592 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 PNMA5Q96PV4 448 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 GCNAQ96QF7 691 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 P2RY13Q9BPV8 354 aa10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 LLPHQ9BRT6 129 aaKnown RBP10.79□□□□□ -0.68
CALCOCO2-227ENST00000575560 RPF1Q9H9Y2 349 aaKnown RBP10.79□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms