RNA–Protein interactions for RNA: ENST00000574121.1

CCNE1-204, Transcript of cyclin E1, humanhuman

TSL 2

Gene CCNE1, Length 1,295 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNE1-204ENST00000574121 DZANK1Q9NVP4 752 aa16.79■□□□□ 0.28
CCNE1-204ENST00000574121 HSFX1Q9UBD0 423 aa16.79■□□□□ 0.28
CCNE1-204ENST00000574121 AFF4Q9UHB7 1163 aaKnown RBP16.79■□□□□ 0.28
CCNE1-204ENST00000574121 BARX2Q9UMQ3 279 aaPredicted RBP16.79■□□□□ 0.28
CCNE1-204ENST00000574121 CDH23Q9H251 3354 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 TSC2P49815 1807 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 WDR27A2RRH5 827 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 A8MXQ7 604 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 WEE2P0C1S8 567 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 ATF2P15336 505 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 HOXB8P17481 243 aaPredicted RBP16.78■□□□□ 0.28
CCNE1-204ENST00000574121 RFX1P22670 979 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 CDH8P55286 799 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 FILIP1LQ4L180 1135 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 INTS6LQ5JSJ4 861 aaKnown RBP16.78■□□□□ 0.28
CCNE1-204ENST00000574121 OSTM1Q86WC4 334 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 PALB2Q86YC2 1186 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 GLYCTKQ8IVS8 523 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 PPM1KQ8N3J5 372 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 PKMYT1Q99640 499 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 SYT15Q9BQS2 421 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 CRACR2AQ9BSW2 395 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 SDCBP2Q9H190 292 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 IGFLR1Q9H665 355 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.78■□□□□ 0.28
CCNE1-204ENST00000574121 APEX2Q9UBZ4 518 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 FBXW11Q9UKB1 542 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 DAAM1Q9Y4D1 1078 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 MYO7AQ13402 2215 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 ATG2AQ2TAZ0 1938 aa16.78■□□□□ 0.28
CCNE1-204ENST00000574121 CILPO75339 1184 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 GLP2RO95838 553 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 EPCAMP16422 314 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 SLC9A1P19634 815 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 LMO2P25791 158 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 GTF2F1P35269 517 aaKnown RBP eCLIP16.77■□□□□ 0.28
CCNE1-204ENST00000574121 RAP1GAPP47736 663 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 ARPP19P56211 112 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 LRMPQ12912 555 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 CCDC85BQ15834 202 aaPredicted RBP16.77■□□□□ 0.28
CCNE1-204ENST00000574121 UVSSAQ2YD98 709 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 FAM171BQ6P995 826 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 CCDC149Q6ZUS6 474 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 TCEAL8Q8IYN2 117 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 CRYBG2Q8N1P7 616 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 KREMEN2Q8NCW0 462 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 VN1R2Q8NFZ6 395 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 SPPL2BQ8TCT7 592 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 ERGIC2Q96RQ1 377 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 NT5C1AQ9BXI3 368 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 ABCB6Q9NP58 842 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 PLCB1Q9NQ66 1216 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 CISHQ9NSE2 258 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 COG5Q9UP83 839 aa16.77■□□□□ 0.28
CCNE1-204ENST00000574121 TRANK1O15050 2925 aa16.77■□□□□ 0.27
CCNE1-204ENST00000574121 SZT2Q5T011 3432 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.76■□□□□ 0.27
CCNE1-204ENST00000574121 PAPLNO95428 1278 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 SERPINC1P01008 464 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 PDGFRBP09619 1106 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 ACAT1P24752 427 aaKnown RBP16.76■□□□□ 0.27
CCNE1-204ENST00000574121 HOXA9P31269 272 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 ELF1P32519 619 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 NDST1P52848 882 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 MFAP3P55082 362 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 UBXN1Q04323 297 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 SKIV2LQ15477 1246 aaKnown RBP16.76■□□□□ 0.27
CCNE1-204ENST00000574121 SLC39A12Q504Y0 691 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 LIN9Q5TKA1 542 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 PHLDB3Q6NSJ2 640 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 RNF19BQ6ZMZ0 732 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 C4orf50Q6ZRC1 276 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 B3GALNT2Q8NCR0 500 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 FUBP3Q96I24 572 aaKnown RBP eCLIP16.76■□□□□ 0.27
CCNE1-204ENST00000574121 TMEM209Q96SK2 561 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 ARID3AQ99856 593 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 RTN4Q9NQC3 1192 aaKnown RBP16.76■□□□□ 0.27
CCNE1-204ENST00000574121 MAN1C1Q9NR34 630 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 ZDHHC7Q9NXF8 308 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 CLDND1Q9NY35 253 aa16.76■□□□□ 0.27
CCNE1-204ENST00000574121 A0A1B0GTH6 734 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 MTMR11A4FU01 709 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 LINC01565O15544 149 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 OR4Q2P0C623 313 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 PTPN1P18031 435 aaKnown RBP16.75■□□□□ 0.27
CCNE1-204ENST00000574121 CD58P19256 250 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 ADCY1Q08828 1119 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 KCNMA1Q12791 1236 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 CFAP221Q4G0U5 840 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 ANKRD54Q6NXT1 300 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 LLGL2Q6P1M3 1020 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 CYP26C1Q6V0L0 522 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 LRRTM3Q86VH5 581 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 ARHGEF19Q8IW93 802 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 UBR7Q8N806 425 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 MYCBPAPQ8TBZ2 947 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 HLA-CQ95604 372 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 RHOBTB2Q9BYZ6 727 aa16.75■□□□□ 0.27
CCNE1-204ENST00000574121 UBE2ZQ9H832 354 aaPredicted RBP16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms