RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 DNAH14Q0VDD8 3507 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 FANCMQ8IYD8 2048 aa18.95■□□□□ 0.62
CIITA-206ENST00000571190 VPS37CA5D8V6 355 aaPredicted RBP18.94■□□□□ 0.62
CIITA-206ENST00000571190 DPYSL4O14531 572 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 HRO43593 1189 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 PAPSS2O95340 614 aaPredicted RBP18.94■□□□□ 0.62
CIITA-206ENST00000571190 CDC25CP30307 473 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 CASP5P51878 434 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 RESTQ13127 1097 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 C1orf228Q6PIY5 440 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 THEM5Q8N1Q8 247 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 CELF5Q8N6W0 485 aaKnown RBP18.94■□□□□ 0.62
CIITA-206ENST00000571190 SPPL2BQ8TCT7 592 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 C2orf15Q8WU43 125 aaKnown RBP18.94■□□□□ 0.62
CIITA-206ENST00000571190 FGFBP2Q9BYJ0 223 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 TBC1D7Q9P0N9 293 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 SEL1LQ9UBV2 794 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 WDR87Q6ZQQ6 2873 aa18.94■□□□□ 0.62
CIITA-206ENST00000571190 FRYLO94915 3013 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 CITO14578 2027 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 A0A087X0B3 334 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 CHURC1-FNTBB4DL54 471 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 IL18RAPO95256 599 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 F11P03951 625 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 FNTBP49356 437 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 GPR15P49685 360 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 ATXN1P54253 815 aaKnown RBP18.93■□□□□ 0.62
CIITA-206ENST00000571190 SMARCB1Q12824 385 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 SRSF5Q13243 272 aaKnown RBP18.93■□□□□ 0.62
CIITA-206ENST00000571190 CCINQ13939 588 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 LRRC32Q14392 662 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 PPP2R5DQ14738 602 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 VEPH1Q14D04 833 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 POSTNQ15063 836 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 PON2Q15165 354 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 L1TD1Q5T7N2 865 aaKnown RBP18.93■□□□□ 0.62
CIITA-206ENST00000571190 CMTM8Q8IZV2 173 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 C1orf127Q8N9H9 656 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 STKLD1Q8NE28 680 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 SECISBP2LQ93073 1101 aaKnown RBP18.93■□□□□ 0.62
CIITA-206ENST00000571190 CHFRQ96EP1 664 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 SAAL1Q96ER3 474 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 FAM213AQ9BRX8 229 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 MRPL44Q9H9J2 332 aaKnown RBP18.93■□□□□ 0.62
CIITA-206ENST00000571190 UPF2Q9HAU5 1272 aaKnown RBP18.93■□□□□ 0.62
CIITA-206ENST00000571190 ABI2Q9NYB9 513 aaPredicted RBP18.93■□□□□ 0.62
CIITA-206ENST00000571190 CCDC39Q9UFE4 941 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 L1RE1Q9UN81 338 aa18.93■□□□□ 0.62
CIITA-206ENST00000571190 PDCD11Q14690 1871 aaKnown RBP18.92■□□□□ 0.62
CIITA-206ENST00000571190 MIA3Q5JRA6 1907 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 F5P12259 2224 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 POLR2BP30876 1174 aaKnown RBP18.92■□□□□ 0.62
CIITA-206ENST00000571190 NLRP12P59046 1061 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 SV2CQ496J9 727 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 DGKKQ5KSL6 1271 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 RRAGBQ5VZM2 374 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 LAIR1Q6GTX8 287 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 NT5DC4Q86YG4 428 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 BRSK2Q8IWQ3 736 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 PDCL2Q8N4E4 241 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 RIN3Q8TB24 985 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 ACCSQ96QU6 501 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 PKMYT1Q99640 499 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 FAM83CQ9BQN1 747 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 GKN1Q9NS71 199 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 GMEB2Q9UKD1 530 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 USP18Q9UMW8 372 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 AGAP1Q9UPQ3 857 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 CCL26Q9Y258 94 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 PCDHB5Q9Y5E4 795 aa18.92■□□□□ 0.62
CIITA-206ENST00000571190 FRMD3A2A2Y4 597 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 OTOL1A6NHN0 477 aaPredicted RBP18.91■□□□□ 0.62
CIITA-206ENST00000571190 GAP43P17677 238 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 TFAMQ00059 246 aaKnown RBP18.91■□□□□ 0.62
CIITA-206ENST00000571190 PLCB2Q00722 1185 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 LMNB2Q03252 620 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 SPEM2Q0P670 501 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 CCDC142Q17RM4 750 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 SDHAF4Q5VUM1 108 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 SV2BQ7L1I2 683 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 DCP1BQ8IZD4 617 aaKnown RBP18.91■□□□□ 0.62
CIITA-206ENST00000571190 USP13Q92995 863 aaPredicted RBP18.91■□□□□ 0.62
CIITA-206ENST00000571190 CBWD1Q9BRT8 395 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 PI4K2AQ9BTU6 479 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 HPS4Q9NQG7 708 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 OLFML3Q9NRN5 406 aa18.91■□□□□ 0.62
CIITA-206ENST00000571190 GOLGA8IPA6NC78 632 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 GOLGA8JA6NMD2 632 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 PRR5-ARHGAP8B1AHC4 643 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 GCNT3O95395 438 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 ITGB3P05106 788 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 SYT1P21579 422 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 PNPLA4P41247 253 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 ARHGAP8P85298 464 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 CEBPZQ03701 1054 aaKnown RBP18.9■□□□□ 0.62
CIITA-206ENST00000571190 ITPRIPL2Q3MIP1 535 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 PKN3Q6P5Z2 889 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 LONP2Q86WA8 852 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 OSTM1Q86WC4 334 aa18.9■□□□□ 0.62
CIITA-206ENST00000571190 MAB21L3Q8N8X9 362 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 69.8 ms