RNA–Protein interactions for RNA: ENST00000569252.5

USB1-215, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 573 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-215ENST00000569252 EMILIN2Q9BXX0 1053 aa17.14■□□□□ 0.33
USB1-215ENST00000569252 UBE2TQ9NPD8 197 aaPredicted RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 BARX2Q9UMQ3 279 aaPredicted RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 TIMM13Q9Y5L4 95 aaPredicted RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 PDCD11Q14690 1871 aaKnown RBP17.14■□□□□ 0.33
USB1-215ENST00000569252 GOLGA6L3A6NEY3 463 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 CTSAP10619 480 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 IGFBP6P24592 240 aaPredicted RBP17.13■□□□□ 0.33
USB1-215ENST00000569252 DSG1Q02413 1049 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 SYCP1Q15431 976 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 SOWAHAQ2M3V2 549 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 CTXN3Q4LDR2 81 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 VARS2Q5ST30 1063 aaKnown RBP17.13■□□□□ 0.33
USB1-215ENST00000569252 WSCD1Q658N2 575 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 SCARA3Q6AZY7 606 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 ZNF280DQ6N043 979 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 TRIM65Q6PJ69 517 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 SCARA5Q6ZMJ2 495 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 GPR65Q8IYL9 337 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 ADGRF2Q8IZF7 708 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 PDCL2Q8N4E4 241 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 FAM124BQ9H5Z6 455 aaPredicted RBP17.13■□□□□ 0.33
USB1-215ENST00000569252 CHST7Q9NS84 486 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 CLEC1BQ9P126 229 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 APEX2Q9UBZ4 518 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 POLIQ9UNA4 740 aa17.13■□□□□ 0.33
USB1-215ENST00000569252 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.12■□□□□ 0.33
USB1-215ENST00000569252 TACC1O75410 805 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 GLP2RO95838 553 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 CYP11A1P05108 521 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 WEE2P0C1S8 567 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 RFX1P22670 979 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 PCSK1P29120 753 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 NDUFV1P49821 464 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 TSPY1Q01534 308 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 SMAD4Q13485 552 aaKnown RBP17.12■□□□□ 0.33
USB1-215ENST00000569252 CUL2Q13617 745 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 PSMD5Q16401 504 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 PLPP4Q5VZY2 271 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 RRAGAQ7L523 313 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 APTXQ7Z2E3 356 aaKnown RBP17.12■□□□□ 0.33
USB1-215ENST00000569252 JAKMIP2Q96AA8 810 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 B3GALT6Q96L58 329 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 ERGIC2Q96RQ1 377 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 NUP58Q9BVL2 599 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 ZBP1Q9H171 429 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 APOBEC3GQ9HC16 384 aaKnown RBP17.12■□□□□ 0.33
USB1-215ENST00000569252 PLCB1Q9NQ66 1216 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 FAM86C1Q9NVL1 165 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 DDX43Q9NXZ2 648 aaKnown RBP17.12■□□□□ 0.33
USB1-215ENST00000569252 PRKAG3Q9UGI9 489 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 CD207Q9UJ71 328 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 L1RE1Q9UN81 338 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 DAAM1Q9Y4D1 1078 aa17.12■□□□□ 0.33
USB1-215ENST00000569252 A0A1W2PQC6 194 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 OR6C75A6NL08 312 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 A8MXQ7 604 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 PER2O15055 1255 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 TEX33O43247 280 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 OAZ2O95190 189 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 TPM1P09493 284 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 CD58P19256 250 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 WARSP23381 471 aaKnown RBP17.11■□□□□ 0.33
USB1-215ENST00000569252 NRIP1P48552 1158 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 CDH8P55286 799 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 ERVFC1P60507 584 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 GCNT1Q02742 428 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 KCNMA1Q12791 1236 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 ADAM15Q13444 863 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 KLHDC7AQ5VTJ3 777 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 KIAA0319Q5VV43 1072 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 CACNA2D4Q7Z3S7 1137 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 DCP1BQ8IZD4 617 aaKnown RBP17.11■□□□□ 0.33
USB1-215ENST00000569252 MRPL43Q8N983 215 aaKnown RBP17.11■□□□□ 0.33
USB1-215ENST00000569252 LMO3Q8TAP4 145 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 PIK3R5Q8WYR1 880 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 ELMO3Q96BJ8 720 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 TNIP3Q96KP6 325 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 XPO4Q9C0E2 1151 aaKnown RBP17.11■□□□□ 0.33
USB1-215ENST00000569252 FAM207AQ9NSI2 230 aaPredicted RBP17.11■□□□□ 0.33
USB1-215ENST00000569252 CDH22Q9UJ99 828 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 BACE2Q9Y5Z0 518 aa17.11■□□□□ 0.33
USB1-215ENST00000569252 LRRN2O75325 713 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 EFEMP2O95967 443 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 PDGFRBP09619 1106 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 SP100P23497 879 aaPredicted RBP17.1■□□□□ 0.33
USB1-215ENST00000569252 KLRC2P26717 231 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 USP8P40818 1118 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 ARPP19P56211 112 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 ARHGAP44Q17R89 818 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 RTP2Q5QGT7 225 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 PHLDB3Q6NSJ2 640 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 SARM1Q6SZW1 724 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 UNC93AQ86WB7 457 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 RNF168Q8IYW5 571 aaPredicted RBP17.1■□□□□ 0.33
USB1-215ENST00000569252 VN1R2Q8NFZ6 395 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 LNX1Q8TBB1 728 aaPredicted RBP17.1■□□□□ 0.33
USB1-215ENST00000569252 MSLNLQ96KJ4 702 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 ACBD6Q9BR61 282 aa17.1■□□□□ 0.33
USB1-215ENST00000569252 MRPL45Q9BRJ2 306 aaKnown RBP17.1■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms