RNA–Protein interactions for RNA: ENST00000569140.1

CDT1-203, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

TSL 3

Gene CDT1, Length 571 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-203ENST00000569140 GNA14O95837 355 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 GTF2H1P32780 548 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 GNL1P36915 607 aaPredicted RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 NOP14P78316 857 aaKnown RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 DUSP4Q13115 394 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 UVSSAQ2YD98 709 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 WDR44Q5JSH3 913 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 INTS6LQ5JSJ4 861 aaKnown RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 GET4Q7L5D6 327 aaPredicted RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 DPH6Q7L8W6 267 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 GRASPQ7Z6J2 395 aaPredicted RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 FRMD5Q7Z6J6 570 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 TCEAL8Q8IYN2 117 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 TTC9BQ8N6N2 239 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 KBTBD7Q8WVZ9 684 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 ZNF707Q96C28 371 aaPredicted RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 SYT15Q9BQS2 421 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 ACBD6Q9BR61 282 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 COL25A1Q9BXS0 654 aaPredicted RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 XYLT2Q9H1B5 865 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 MAGEC2Q9UBF1 373 aaPredicted RBP13.71□□□□□ -0.21
CDT1-203ENST00000569140 YIPF1Q9Y548 306 aa13.71□□□□□ -0.21
CDT1-203ENST00000569140 XIRP2A4UGR9 3374 aa13.71□□□□□ -0.22
CDT1-203ENST00000569140 CLUHO75153 1309 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 WARSP23381 471 aaKnown RBP13.7□□□□□ -0.22
CDT1-203ENST00000569140 LMO2P25791 158 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 HOXA9P31269 272 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 GBP2P32456 591 aaPredicted RBP13.7□□□□□ -0.22
CDT1-203ENST00000569140 ALDH1A3P47895 512 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 CDH8P55286 799 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 NTHL1P78549 312 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 CYP27A1Q02318 531 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 ZP2Q05996 745 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 PLD1Q13393 1074 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 STX1AQ16623 288 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 CBWD6Q4V339 395 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 HSP90AA4PQ58FG1 418 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 CBWD3Q5JTY5 395 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 CBWD5Q5RIA9 395 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 IQCEQ6IPM2 695 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 LRRTM3Q86VH5 581 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 SPATA2LQ8IUW3 424 aaPredicted RBP13.7□□□□□ -0.22
CDT1-203ENST00000569140 TDRD5Q8NAT2 981 aaKnown RBP13.7□□□□□ -0.22
CDT1-203ENST00000569140 FBXL13Q8NEE6 735 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 SPATA18Q8TC71 538 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 TAF4BQ92750 862 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 CNOT6LQ96LI5 555 aaKnown RBP13.7□□□□□ -0.22
CDT1-203ENST00000569140 CORO1BQ9BR76 489 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 HCFC1R1Q9NWW0 138 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 TMEM63CQ9P1W3 806 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 PRKAG3Q9UGI9 489 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 GTF3C4Q9UKN8 822 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 CDH9Q9ULB4 789 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 NR2E1Q9Y466 385 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 PCDHB5Q9Y5E4 795 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.7□□□□□ -0.22
CDT1-203ENST00000569140 C2orf16Q68DN1 1984 aa13.7□□□□□ -0.22
CDT1-203ENST00000569140 GABRDO14764 452 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 N4BP1O75113 896 aaKnown RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 ATP2C2O75185 946 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 ASS1P00966 412 aaKnown RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 CD58P19256 250 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 PTMSP20962 102 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 MTIF2P46199 727 aaKnown RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 EPHB3P54753 998 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 CETN1Q12798 172 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 LRMPQ12912 555 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 VEPH1Q14D04 833 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 TAF12Q16514 161 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 NFE2Q16621 373 aaPredicted RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 CCDC142Q17RM4 750 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 PABPC1LQ4VXU2 614 aaKnown RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 MDH1BQ5I0G3 518 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 FOXR2Q6PJQ5 311 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 CYP26C1Q6V0L0 522 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 FAM114A1Q8IWE2 563 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 GJD3Q8N144 294 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 SPPL2BQ8TCT7 592 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 C2orf15Q8WU43 125 aaKnown RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 SEMA4DQ92854 862 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 SLC35C1Q96A29 364 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 MYLPFQ96A32 169 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 ZNF512Q96ME7 567 aaPredicted RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 NIF3L1Q9GZT8 377 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 DPEP3Q9H4B8 488 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 VRTNQ9H8Y1 702 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 WDR6Q9NNW5 1121 aaKnown RBP13.69□□□□□ -0.22
CDT1-203ENST00000569140 TMLHEQ9NVH6 421 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 ANO10Q9NW15 660 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 RAB20Q9NX57 234 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 MAFFQ9ULX9 164 aa13.69□□□□□ -0.22
CDT1-203ENST00000569140 UNC80Q8N2C7 3258 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 PES1O00541 588 aaKnown RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 LRRN2O75325 713 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 TACC1O75410 805 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 VNN2O95498 520 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 MYL4P12829 197 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 PTPN2P17706 415 aa13.68□□□□□ -0.22
CDT1-203ENST00000569140 TRIM21P19474 475 aaKnown RBP13.68□□□□□ -0.22
CDT1-203ENST00000569140 FSHRP23945 695 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms