RNA–Protein interactions for RNA: ENST00000567399.5

COMMD4-219, Transcript of COMM domain containing 4, humanhuman

TSL 5

Gene COMMD4, Length 976 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-219ENST00000567399 WEE2P0C1S8 567 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 PRKCSHP14314 528 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-219ENST00000567399 MTHFRP42898 656 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 RAP1GAPP47736 663 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 ALDH1A3P47895 512 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 CDR1P51861 262 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 MARSP56192 900 aaKnown RBP16.21■□□□□ 0.19
COMMD4-219ENST00000567399 SMARCB1Q12824 385 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 DUSP4Q13115 394 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 NFE2Q16621 373 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-219ENST00000567399 ANO6Q4KMQ2 910 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 TJAP1Q5JTD0 557 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 C11orf57Q6ZUT1 292 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-219ENST00000567399 RTL10Q7L3V2 364 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 OSTM1Q86WC4 334 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 TRIM59Q8IWR1 403 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 SMRP1Q8NCR6 262 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 SMG7Q92540 1137 aaKnown RBP16.21■□□□□ 0.19
COMMD4-219ENST00000567399 MED15Q96RN5 788 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 S1PR5Q9H228 398 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 SMYD3Q9H7B4 428 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 ABI2Q9NYB9 513 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-219ENST00000567399 CDH9Q9ULB4 789 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 NFE2L3Q9Y4A8 694 aa16.21■□□□□ 0.19
COMMD4-219ENST00000567399 USP15Q9Y4E8 981 aaPredicted RBP16.21■□□□□ 0.19
COMMD4-219ENST00000567399 SCN1AP35498 2009 aa16.21■□□□□ 0.18
COMMD4-219ENST00000567399 GRXCR2A6NFK2 248 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 GABRDO14764 452 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 P4HA2O15460 535 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 CDK11BP21127 795 aaKnown RBP16.2■□□□□ 0.18
COMMD4-219ENST00000567399 LMO2P25791 158 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 MCCD1P59942 119 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-219ENST00000567399 LRMPQ12912 555 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 NFKBIBQ15653 356 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 MGAT5BQ3V5L5 792 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 INTS6LQ5JSJ4 861 aaKnown RBP16.2■□□□□ 0.18
COMMD4-219ENST00000567399 GPR149Q86SP6 731 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 SPATA2LQ8IUW3 424 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-219ENST00000567399 TCEAL8Q8IYN2 117 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 ATAD1Q8NBU5 361 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 ANKRD20A12PQ8NF67 263 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 FAM200AQ8TCP9 573 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 C2orf15Q8WU43 125 aaKnown RBP16.2■□□□□ 0.18
COMMD4-219ENST00000567399 KBTBD7Q8WVZ9 684 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 SEMA4DQ92854 862 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 NECTIN4Q96NY8 510 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 SEPT5Q99719 369 aaPredicted RBP16.2■□□□□ 0.18
COMMD4-219ENST00000567399 RTP3Q9BQQ7 232 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 SYT15Q9BQS2 421 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 PRKD2Q9BZL6 878 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 NIF3L1Q9GZT8 377 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 SAMSN1Q9NSI8 373 aaKnown RBP16.2■□□□□ 0.18
COMMD4-219ENST00000567399 GTF3C4Q9UKN8 822 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 SLC27A5Q9Y2P5 690 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 PCDHB5Q9Y5E4 795 aa16.2■□□□□ 0.18
COMMD4-219ENST00000567399 MTMR11A4FU01 709 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 KCNJ18B7U540 433 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 SEC24AO95486 1093 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 IL9P15248 144 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 CD58P19256 250 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 TUFMP49411 452 aaKnown RBP16.19■□□□□ 0.18
COMMD4-219ENST00000567399 PSMC1P62191 440 aaKnown RBP16.19■□□□□ 0.18
COMMD4-219ENST00000567399 MYL5Q02045 173 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 CYP27A1Q02318 531 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 PLD1Q13393 1074 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 KCNJ12Q14500 433 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 CBX2Q14781 532 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-219ENST00000567399 MAPRE1Q15691 268 aaKnown RBP16.19■□□□□ 0.18
COMMD4-219ENST00000567399 TAF12Q16514 161 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 IQCEQ6IPM2 695 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 CYP26C1Q6V0L0 522 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 C4orf50Q6ZRC1 276 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 CMASQ8NFW8 434 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-219ENST00000567399 SPPL2BQ8TCT7 592 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 TNIP3Q96KP6 325 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 ZNF512Q96ME7 567 aaPredicted RBP16.19■□□□□ 0.18
COMMD4-219ENST00000567399 CYP3A43Q9HB55 503 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 INSL5Q9Y5Q6 135 aa16.19■□□□□ 0.18
COMMD4-219ENST00000567399 PLXNA3P51805 1871 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 MYO7AQ13402 2215 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 TRANK1O15050 2925 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 SMTNL1A8MU46 457 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 BECN2A8MW95 431 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 HCRTO43612 131 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 ATP2C2O75185 946 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 HOXA9P31269 272 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 EPHB3P54753 998 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 YWHAEP62258 255 aaKnown RBP16.18■□□□□ 0.18
COMMD4-219ENST00000567399 TWF1Q12792 350 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 SMAD2Q15796 467 aaKnown RBP16.18■□□□□ 0.18
COMMD4-219ENST00000567399 MAN2A1Q16706 1144 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 LIMS2Q7Z4I7 341 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 LRRTM3Q86VH5 581 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 IRF2BP1Q8IU81 584 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 TATDN2Q93075 761 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 NT5C1BQ96P26 610 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 TUBGCP2Q9BSJ2 902 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 APOBEC3GQ9HC16 384 aaKnown RBP16.18■□□□□ 0.18
COMMD4-219ENST00000567399 COQ4Q9Y3A0 265 aa16.18■□□□□ 0.18
COMMD4-219ENST00000567399 MYBPHLA2RUH7 354 aa16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 23 ms