RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 GKN1Q9NS71 199 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 KCND2Q9NZV8 630 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 ANKFY1Q9P2R3 1169 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 EBF1Q9UH73 591 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 WASF3Q9UPY6 502 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 IGF2RP11717 2491 aa13.85□□□□□ -0.19
RNF40-208ENST00000565995 ANO9A1A5B4 782 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 OTOL1A6NHN0 477 aaPredicted RBP13.84□□□□□ -0.19
RNF40-208ENST00000565995 PIRO00625 290 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 HARSP12081 509 aaKnown RBP13.84□□□□□ -0.19
RNF40-208ENST00000565995 ATF6P18850 670 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 SCP2P22307 547 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 CDC25AP30304 524 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 MPLP40238 635 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 SPAG1Q07617 926 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 SMARCB1Q12824 385 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 GRSF1Q12849 480 aaKnown RBP eCLIP13.84□□□□□ -0.19
RNF40-208ENST00000565995 CCDC6Q16204 474 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 ENOX2Q16206 610 aaKnown RBP13.84□□□□□ -0.19
RNF40-208ENST00000565995 IL17AQ16552 155 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 PLK5Q496M5 336 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 ARMCX5Q6P1M9 558 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 TMEM150AQ86TG1 271 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 CD302Q8IX05 232 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 SYT2Q8N9I0 419 aaPredicted RBP13.84□□□□□ -0.19
RNF40-208ENST00000565995 KDF1Q8NAX2 398 aaPredicted RBP13.84□□□□□ -0.19
RNF40-208ENST00000565995 KIF12Q96FN5 646 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 SENP8Q96LD8 212 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 ZCWPW1Q9H0M4 648 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 DUSP15Q9H1R2 295 aaPredicted RBP13.84□□□□□ -0.19
RNF40-208ENST00000565995 TBX20Q9UMR3 447 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 SLC8A2Q9UPR5 921 aa13.84□□□□□ -0.19
RNF40-208ENST00000565995 ZFYVE26Q68DK2 2539 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 H0YCG3 227 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 SEC24BO95487 1268 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 PIGRP01833 764 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 CCDC192P0DO97 292 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 ODC1P11926 461 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 DRD1P21728 446 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 DDX6P26196 483 aaKnown RBP eCLIP13.83□□□□□ -0.2
RNF40-208ENST00000565995 TNFSF9P41273 254 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 NEK4P51957 841 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 NCKAP1LP55160 1127 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 AMPD2Q01433 879 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 PPP2R3AQ06190 1150 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 OR10T2Q8NGX3 314 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 LPIN3Q9BQK8 851 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 NOL7Q9UMY1 257 aaKnown RBP13.83□□□□□ -0.2
RNF40-208ENST00000565995 DERAQ9Y315 318 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 MYH10P35580 1976 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 GON4LQ3T8J9 2241 aa13.83□□□□□ -0.2
RNF40-208ENST00000565995 PKD1L2Q7Z442 2459 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 PP2D1A8MPX8 630 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 PPEF2O14830 753 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 OGTO15294 1046 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 SOAT2O75908 522 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 F11P03951 625 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 PXNP49023 591 aaPredicted RBP13.82□□□□□ -0.2
RNF40-208ENST00000565995 SLC12A3P55017 1021 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 CYP4F8P98187 520 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 ZNF268Q14587 947 aaPredicted RBP13.82□□□□□ -0.2
RNF40-208ENST00000565995 NBR1Q14596 966 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 VEPH1Q14D04 833 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 FBXO43Q4G163 708 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 C9orf57Q5W0N0 161 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 RNF43Q68DV7 783 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 SYT13Q7L8C5 426 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 SPPL2BQ8TCT7 592 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 CCSER1Q9C0I3 900 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 KIF9Q9HAQ2 790 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 FBRSL1Q9HCM7 1045 aaKnown RBP13.82□□□□□ -0.2
RNF40-208ENST00000565995 DSEQ9UL01 958 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 PCDHB6Q9Y5E3 794 aa13.82□□□□□ -0.2
RNF40-208ENST00000565995 BCLAF3A2AJT9 711 aaKnown RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 RHOBTB1O94844 696 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 EGFP01133 1207 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 HAPLN1P10915 354 aaPredicted RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 HMGA1P17096 107 aaKnown RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 GALK1P51570 392 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 GUCY2FP51841 1108 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 NLRP12P59046 1061 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 POU5F1Q01860 360 aaKnown RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 KARSQ15046 597 aaKnown RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 SLC39A12Q504Y0 691 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 DTHD1Q6ZMT9 781 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 LRRTM3Q86VH5 581 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 USP13Q92995 863 aaPredicted RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 PNMA5Q96PV4 448 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 TMEM121BQ9BXQ6 578 aaPredicted RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 EBF3Q9H4W6 596 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 RPF1Q9H9Y2 349 aaKnown RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 TDP1Q9NUW8 608 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 LARSQ9P2J5 1176 aaKnown RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 CPSF3Q9UKF6 684 aaKnown RBP13.81□□□□□ -0.2
RNF40-208ENST00000565995 CCL26Q9Y258 94 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 ITPR1Q14643 2758 aa13.81□□□□□ -0.2
RNF40-208ENST00000565995 A0A0B4J269 797 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 RNF40O75150 1001 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 KCNA4P22459 653 aa13.8□□□□□ -0.2
RNF40-208ENST00000565995 HMGN5P82970 282 aaKnown RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms