RNA–Protein interactions for RNA: ENST00000565507.5

SCAPER-215, Transcript of S-phase cyclin A associated protein in the ER, human

TSL 5

Gene SCAPER, Length 2,627 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCAPER-215	ENST00000565507	TJP3	O95049	919 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	ASS1	P00966	412 aa	Known RBP	13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	ARSE	P51690	589 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	MCL1	Q07820	350 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	E2F5	Q15329	346 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	TMED2	Q15363	201 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	OASL	Q15646	514 aa	Known RBP	13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	GNPTAB	Q3T906	1256 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	RNF43	Q68DV7	783 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	GADL1	Q6ZQY3	521 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	ASRGL1	Q7L266	308 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	RPAIN	Q86UA6	219 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	C12orf42	Q96LP6	360 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	CFAP57	Q96MR6	1250 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	MYCBP	Q99417	103 aa	Predicted RBP	13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	ZNF302	Q9NR11	478 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	ZNF148	Q9UQR1	794 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	DRG1	Q9Y295	367 aa	Known RBP	13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	HTT	P42858	3142 aa		13.9	□□□□□ -0.18
SCAPER-215	ENST00000565507	FAM189A1	O60320	539 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	ALAD	P13716	330 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	ATF7	P17544	494 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	CETN2	P41208	172 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	ACVR2B	Q13705	512 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	TTLL12	Q14166	644 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	NEDD9	Q14511	834 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	PPP1R15B	Q5SWA1	713 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	SPOCD1	Q6ZMY3	1216 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	CEP128	Q6ZU80	1094 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	MCEE	Q96PE7	176 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	ARHGEF3	Q9NR81	526 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	DYNC1LI1	Q9Y6G9	523 aa	Known RBP	13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	hCG_1818297	A0A087WSY0	165 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	EXOC1L	A0A1B0GW35	172 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	IGF2BP3	O00425	579 aa	Known RBP eCLIP	13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	MAGEB2	O15479	319 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	KRT1	P04264	644 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	PTPN7	P35236	360 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	ALDH5A1	P51649	535 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	ECHDC2	Q86YB7	292 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	WDTC1	Q8N5D0	677 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	NIFK	Q9BYG3	293 aa	Known RBP	13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	TMEM134	Q9H6X4	195 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	ACAD9	Q9H845	621 aa		13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	EPB41L3	Q9Y2J2	1087 aa	Predicted RBP	13.89	□□□□□ -0.19
SCAPER-215	ENST00000565507	IGKV6D-21	A0A0A0MT36	114 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	TNFSF9	P41273	254 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	CDKN2B	P42772	138 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	SLC18A1	P54219	525 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	VCP	P55072	806 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	GPS1	Q13098	491 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	RNASEH2B	Q5TBB1	312 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	SLC7A3	Q8WY07	619 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	NKD2	Q969F2	451 aa	Predicted RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	GRAMD1A	Q96CP6	724 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	CDCA5	Q96FF9	252 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	TTC25	Q96NG3	672 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	TEX13B	Q9BXU2	312 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	UBN1	Q9NPG3	1134 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	OTOF	Q9HC10	1997 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	ALOX15B	O15296	676 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	PRPF4	O43172	522 aa	Known RBP eCLIP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	SPAG7	O75391	227 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	LSM8	O95777	96 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	CALB1	P05937	261 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	ICAM3	P32942	547 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	IL9R	Q01113	521 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	NR1H3	Q13133	447 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	CAPS	Q13938	189 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	MORF4L2	Q15014	288 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	TARBP2	Q15633	366 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	HP1BP3	Q5SSJ5	553 aa	Predicted RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	NOL9	Q5SY16	702 aa	Known RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	BRSK2	Q8IWQ3	736 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	ACSF2	Q96CM8	615 aa	Predicted RBP	13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	KLHL29	Q96CT2	875 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	PCYT2	Q99447	389 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	PITPNM3	Q9BZ71	974 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	KIF9	Q9HAQ2	790 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	TXNRD2	Q9NNW7	524 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	KLHL14	Q9P2G3	628 aa		13.88	□□□□□ -0.19
SCAPER-215	ENST00000565507	C19orf81	C9J6K1	198 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	KRT16	P08779	473 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	CCNB1	P14635	433 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	EZR	P15311	586 aa	Known RBP	13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	BRD2	P25440	801 aa	Known RBP	13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	PKN2	Q16513	984 aa	Known RBP	13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	TFDP3	Q5H9I0	405 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	EEPD1	Q7L9B9	569 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	KIF2B	Q8N4N8	673 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	NIPA2	Q8N8Q9	360 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	TBC1D31	Q96DN5	1066 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	GRID1	Q9ULK0	1009 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	LCT	P09848	1927 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	C3orf70	A6NLC5	250 aa	Predicted RBP	13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	ADCY3	O60266	1144 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	ITGAV	P06756	1048 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	CDH5	P33151	784 aa	Predicted RBP	13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	EPHX2	P34913	555 aa		13.87	□□□□□ -0.19
SCAPER-215	ENST00000565507	MYL6	P60660	151 aa		13.87	□□□□□ -0.19

Retrieved 100 of 20,778 RNA–protein pairs in 16 ms