RNA–Protein interactions for RNA: ENST00000564542.5

CDR2-204, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 5

Gene CDR2, Length 1,056 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-204ENST00000564542 PPM1JQ5JR12 505 aa15.24■□□□□ 0.03
CDR2-204ENST00000564542 CEP68Q76N32 757 aa15.24■□□□□ 0.03
CDR2-204ENST00000564542 METTL23Q86XA0 190 aa15.24■□□□□ 0.03
CDR2-204ENST00000564542 FAM160A2Q8N612 972 aaPredicted RBP15.24■□□□□ 0.03
CDR2-204ENST00000564542 SPPL2BQ8TCT7 592 aa15.24■□□□□ 0.03
CDR2-204ENST00000564542 FIZ1Q96SL8 496 aa15.24■□□□□ 0.03
CDR2-204ENST00000564542 CCSER1Q9C0I3 900 aa15.24■□□□□ 0.03
CDR2-204ENST00000564542 BLOC1S4Q9NUP1 217 aa15.24■□□□□ 0.03
CDR2-204ENST00000564542 OBSL1O75147 1896 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 RALGAPA1Q6GYQ0 2036 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 CYB561D2O14569 222 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 KRT18P05783 430 aaKnown RBP15.23■□□□□ 0.03
CDR2-204ENST00000564542 PLCG1P19174 1290 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 ACOT2P49753 483 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 TAF6P49848 677 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 TAF12Q16514 161 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 CMTM8Q8IZV2 173 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 THEM5Q8N1Q8 247 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 RAD54LQ92698 747 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 PYM1Q9BRP8 204 aaKnown RBP15.23■□□□□ 0.03
CDR2-204ENST00000564542 SLC46A2Q9BY10 475 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 SMG9Q9H0W8 520 aaKnown RBP15.23■□□□□ 0.03
CDR2-204ENST00000564542 ZHX3Q9H4I2 956 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 GREB1Q4ZG55 1949 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 DENND4CQ5VZ89 1909 aa15.23■□□□□ 0.03
CDR2-204ENST00000564542 ANKRD63C9JTQ0 380 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 GDF9O60383 454 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 HAPLN1P10915 354 aaPredicted RBP15.22■□□□□ 0.03
CDR2-204ENST00000564542 DDX6P26196 483 aaKnown RBP eCLIP15.22■□□□□ 0.03
CDR2-204ENST00000564542 GJB2P29033 226 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 NMT1P30419 496 aaKnown RBP15.22■□□□□ 0.03
CDR2-204ENST00000564542 AVPR1AP37288 418 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 POU5F1Q01860 360 aaKnown RBP15.22■□□□□ 0.03
CDR2-204ENST00000564542 MCM6Q14566 821 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 RABEP1Q15276 862 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 ADALQ6DHV7 355 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 SLFN12LQ6IEE8 588 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 LRRTM3Q86VH5 581 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 RASSF8Q8NHQ8 419 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 GIPC2Q8TF65 315 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 FAM83CQ9BQN1 747 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 ST6GALNAC4Q9H4F1 302 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 DPP3Q9NY33 737 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 ABI2Q9NYB9 513 aaPredicted RBP15.22■□□□□ 0.03
CDR2-204ENST00000564542 AGO2Q9UKV8 859 aaKnown RBP15.22■□□□□ 0.03
CDR2-204ENST00000564542 STYXL1Q9Y6J8 313 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 CHD8Q9HCK8 2581 aa15.22■□□□□ 0.03
CDR2-204ENST00000564542 CCDC163A0A0D9SF12 145 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 TISP43B9A030 160 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 EXTL3O43909 919 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 KRT37O76014 449 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 BMP15O95972 392 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 HOXC13P31276 330 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 LONP1P36776 959 aaKnown RBP15.21■□□□□ 0.03
CDR2-204ENST00000564542 CDR1P51861 262 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 NLRP12P59046 1061 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 GRSF1Q12849 480 aaKnown RBP eCLIP15.21■□□□□ 0.03
CDR2-204ENST00000564542 RUNX3Q13761 415 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 KARSQ15046 597 aaKnown RBP15.21■□□□□ 0.03
CDR2-204ENST00000564542 SV2CQ496J9 727 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 ZC2HC1CQ53FD0 456 aaPredicted RBP15.21■□□□□ 0.03
CDR2-204ENST00000564542 TMEM196Q5HYL7 178 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 WSCD1Q658N2 575 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 PKN3Q6P5Z2 889 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 TMEM150AQ86TG1 271 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 DCP1BQ8IZD4 617 aaKnown RBP15.21■□□□□ 0.03
CDR2-204ENST00000564542 GAB3Q8WWW8 586 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 DDX1Q92499 740 aaKnown RBP15.21■□□□□ 0.03
CDR2-204ENST00000564542 LARP4BQ92615 738 aaKnown RBP15.21■□□□□ 0.03
CDR2-204ENST00000564542 LOXL4Q96JB6 756 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 TMX3Q96JJ7 454 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 ZNF560Q96MR9 790 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 KIF9Q9HAQ2 790 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 HPS4Q9NQG7 708 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 GKN1Q9NS71 199 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 CCL26Q9Y258 94 aa15.21■□□□□ 0.03
CDR2-204ENST00000564542 SOBPA7XYQ1 873 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 KPNA7A9QM74 516 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 TRDMT1O14717 391 aaKnown RBP15.2■□□□□ 0.02
CDR2-204ENST00000564542 ATG13O75143 517 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 RPP40O75818 363 aaKnown RBP15.2■□□□□ 0.02
CDR2-204ENST00000564542 IL18RAPO95256 599 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 F11P03951 625 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 HMGA1P17096 107 aaKnown RBP15.2■□□□□ 0.02
CDR2-204ENST00000564542 LIMK1P53667 647 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 BFSP1Q12934 665 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 C8orf34Q49A92 452 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 FSTL4Q6MZW2 842 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 NT5DC4Q86YG4 428 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 EFCAB13Q8IY85 973 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 MAB21L3Q8N8X9 362 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 USP13Q92995 863 aaPredicted RBP15.2■□□□□ 0.02
CDR2-204ENST00000564542 HVCN1Q96D96 273 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 CHFRQ96EP1 664 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 EBF3Q9H4W6 596 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 PCDHB5Q9Y5E4 795 aa15.2■□□□□ 0.02
CDR2-204ENST00000564542 OTOL1A6NHN0 477 aaPredicted RBP15.19■□□□□ 0.02
CDR2-204ENST00000564542 AKAP3O75969 853 aa15.19■□□□□ 0.02
CDR2-204ENST00000564542 EPN2O95208 641 aa15.19■□□□□ 0.02
CDR2-204ENST00000564542 CSH1P0DML2 217 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms