RNA–Protein interactions for RNA: ENST00000563180.1

IRF8-203, Transcript of interferon regulatory factor 8, humanhuman

TSL 1 (best) BASIC

Gene IRF8, Length 1,394 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF8-203ENST00000563180 LRRTM3Q86VH5 581 aa18.36■□□□□ 0.53
IRF8-203ENST00000563180 DCP1BQ8IZD4 617 aaKnown RBP18.36■□□□□ 0.53
IRF8-203ENST00000563180 CCDC150Q8NCX0 1101 aa18.36■□□□□ 0.53
IRF8-203ENST00000563180 CMASQ8NFW8 434 aaPredicted RBP18.36■□□□□ 0.53
IRF8-203ENST00000563180 OR6B3Q8NGW1 331 aa18.36■□□□□ 0.53
IRF8-203ENST00000563180 SMYD3Q9H7B4 428 aa18.36■□□□□ 0.53
IRF8-203ENST00000563180 APOBEC3GQ9HC16 384 aaKnown RBP18.36■□□□□ 0.53
IRF8-203ENST00000563180 ZDHHC7Q9NXF8 308 aa18.36■□□□□ 0.53
IRF8-203ENST00000563180 FAM50BQ9Y247 325 aa18.36■□□□□ 0.53
IRF8-203ENST00000563180 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.36■□□□□ 0.53
IRF8-203ENST00000563180 LETM1O95202 739 aaPredicted RBP18.35■□□□□ 0.53
IRF8-203ENST00000563180 VNN2O95498 520 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 IL9P15248 144 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 LMO2P25791 158 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 PCSK1P29120 753 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 NOP14P78316 857 aaKnown RBP18.35■□□□□ 0.53
IRF8-203ENST00000563180 KCNH2Q12809 1159 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 UVSSAQ2YD98 709 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 HSP90AA4PQ58FG1 418 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 GPR149Q86SP6 731 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 FAM114A1Q8IWE2 563 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 TCEAL8Q8IYN2 117 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 ENOX1Q8TC92 643 aaKnown RBP18.35■□□□□ 0.53
IRF8-203ENST00000563180 PRKD2Q9BZL6 878 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 SDCBP2Q9H190 292 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 DNAJC25Q9H1X3 360 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 MAFFQ9ULX9 164 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 COQ4Q9Y3A0 265 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 C2orf16Q68DN1 1984 aa18.35■□□□□ 0.53
IRF8-203ENST00000563180 MTMR11A4FU01 709 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 N4BP1O75113 896 aaKnown RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 ATP2C2O75185 946 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 AFPP02771 609 aaKnown RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 HNRNPA1P09651 372 aaKnown RBP eCLIP18.34■□□□□ 0.53
IRF8-203ENST00000563180 MTIF2P46199 727 aaKnown RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 DUSP4Q13115 394 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 SMAD2Q15796 467 aaKnown RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 WDR44Q5JSH3 913 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 INTS6LQ5JSJ4 861 aaKnown RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 TJAP1Q5JTD0 557 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 ATAT1Q5SQI0 421 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 ATAD1Q8NBU5 361 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 SUSD6Q92537 303 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 SMG7Q92540 1137 aaKnown RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 ZNF707Q96C28 371 aaPredicted RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 RIPOR3Q96MK2 946 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 SYT15Q9BQS2 421 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 PIDD1Q9HB75 910 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 SAMSN1Q9NSI8 373 aaKnown RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 TMLHEQ9NVH6 421 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 MAGEC2Q9UBF1 373 aaPredicted RBP18.34■□□□□ 0.53
IRF8-203ENST00000563180 CDH9Q9ULB4 789 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 SLC27A5Q9Y2P5 690 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 NFE2L3Q9Y4A8 694 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 NME7Q9Y5B8 376 aa18.34■□□□□ 0.53
IRF8-203ENST00000563180 A8MXQ7 604 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 CCL16O15467 120 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 MTHFRP42898 656 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 ASPAP45381 313 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 CBX2Q14781 532 aaPredicted RBP18.33■□□□□ 0.53
IRF8-203ENST00000563180 RTL10Q7L3V2 364 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 TATDN2Q93075 761 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 NIF3L1Q9GZT8 377 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 CRISPLD1Q9H336 500 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 GTF3C4Q9UKN8 822 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 INSL5Q9Y5Q6 135 aa18.33■□□□□ 0.53
IRF8-203ENST00000563180 SYCE3A1L190 88 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 MYBPHLA2RUH7 354 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 PMM2O15305 246 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 P4HA2O15460 535 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 LRG1P02750 347 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 HOXA9P31269 272 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 PSMC1P62191 440 aaKnown RBP18.32■□□□□ 0.52
IRF8-203ENST00000563180 CETN1Q12798 172 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 SMARCB1Q12824 385 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 NFKBIBQ15653 356 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 CCDC142Q17RM4 750 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 ANO6Q4KMQ2 910 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 CYP26C1Q6V0L0 522 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 PKMYT1Q99640 499 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 BCO2Q9BYV7 579 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 ABI2Q9NYB9 513 aaPredicted RBP18.32■□□□□ 0.52
IRF8-203ENST00000563180 PCDHB5Q9Y5E4 795 aa18.32■□□□□ 0.52
IRF8-203ENST00000563180 KCNJ18B7U540 433 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 XYLBO75191 536 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 PAPLNO95428 1278 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 TWF1Q12792 350 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 LRMPQ12912 555 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 KCNJ12Q14500 433 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 NFE2Q16621 373 aaPredicted RBP18.31■□□□□ 0.52
IRF8-203ENST00000563180 FAM171BQ6P995 826 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 TTC9BQ8N6N2 239 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 SPPL2BQ8TCT7 592 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 C2orf15Q8WU43 125 aaKnown RBP18.31■□□□□ 0.52
IRF8-203ENST00000563180 NECTIN4Q96NY8 510 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 LPIN3Q9BQK8 851 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 RHOBTB2Q9BYZ6 727 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 DPEP3Q9H4B8 488 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 POMKQ9H5K3 350 aa18.31■□□□□ 0.52
IRF8-203ENST00000563180 CYP3A43Q9HB55 503 aa18.31■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms