RNA–Protein interactions for RNA: ENST00000562829.1

TNRC6A-209, Transcript of trinucleotide repeat containing 6A, humanhuman

TSL 2

Gene TNRC6A, Length 277 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6A-209ENST00000562829 PDE11AQ9HCR9 933 aa18.08■□□□□ 0.48
TNRC6A-209ENST00000562829 KBTBD4Q9NVX7 518 aa18.08■□□□□ 0.48
TNRC6A-209ENST00000562829 PIAS3Q9Y6X2 628 aa18.08■□□□□ 0.48
TNRC6A-209ENST00000562829 PATJQ8NI35 1801 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 HUS1O60921 280 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 LMNAP02545 664 aaKnown RBP18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 CYP4F8P98187 520 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 SMARCB1Q12824 385 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 E2F4Q16254 413 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 LMBRD2Q68DH5 695 aaPredicted RBP18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 SHC4Q6S5L8 630 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 GAREM2Q75VX8 874 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 LRRTM3Q86VH5 581 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 ARID3BQ8IVW6 561 aaPredicted RBP18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 PDCL2Q8N4E4 241 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 FAM3CQ92520 227 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 ANKRD36BP1Q96IX9 119 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 MTMR12Q9C0I1 747 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 SEMA4AQ9H3S1 761 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 ITGA11Q9UKX5 1188 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 PCDHB5Q9Y5E4 795 aa18.07■□□□□ 0.48
TNRC6A-209ENST00000562829 FAM186AA6NE01 2351 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 KIAA0391O15091 583 aaKnown RBP18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 F13A1P00488 732 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 ZSCAN22P10073 491 aaPredicted RBP18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 HAPLN1P10915 354 aaPredicted RBP18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 CDC25CP30307 473 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 RBP5P82980 135 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 MYL7Q01449 175 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 CSTF1Q05048 431 aaKnown RBP18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 FAM26FQ5R3K3 315 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 LRRC52Q8N7C0 313 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 SPRYD3Q8NCJ5 442 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 RSPRY1Q96DX4 576 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 TRPV5Q9NQA5 729 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 DDX43Q9NXZ2 648 aaKnown RBP18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 L1RE1Q9UN81 338 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 SNX9Q9Y5X1 595 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 COL4A2P08572 1712 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 MYO15AQ9UKN7 3530 aa18.06■□□□□ 0.48
TNRC6A-209ENST00000562829 NUP210Q8TEM1 1887 aaPredicted RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 RIF1Q5UIP0 2472 aaKnown RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 ZNF233A6NK53 670 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 POLR2DO15514 142 aaKnown RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 PRPF40AO75400 957 aaKnown RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 PDIA4P13667 645 aaKnown RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 ACAT1P24752 427 aaKnown RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 ME1P48163 572 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 NFE2Q16621 373 aaPredicted RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 MAML2Q8IZL2 1156 aaPredicted RBP18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 CLDN23Q96B33 292 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 HINFPQ9BQA5 517 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 PI4K2AQ9BTU6 479 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 TASP1Q9H6P5 420 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 FAM13BQ9NYF5 915 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 HSPBP1Q9NZL4 362 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 FBXO4Q9UKT5 387 aa18.05■□□□□ 0.48
TNRC6A-209ENST00000562829 SLC38A8A6NNN8 435 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 CHADO15335 359 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 EIF3DO15371 548 aaKnown RBP eCLIP18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 KINO60870 393 aaKnown RBP18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 TNNC2P02585 160 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 RPS9P46781 194 aaKnown RBP18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 KPNA1P52294 538 aaPredicted RBP18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 MYO1EQ12965 1108 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 SURF1Q15526 300 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 SCARA3Q6AZY7 606 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 CBWD2Q8IUF1 395 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 ADGRF2Q8IZF7 708 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 TMEM86AQ8N2M4 240 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 MKNK1Q9BUB5 465 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 BLZF1Q9H2G9 400 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 MAGEF1Q9HAY2 307 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 IL21Q9HBE4 155 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 TMLHEQ9NVH6 421 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 INTS13Q9NVM9 706 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 SIX4Q9UIU6 781 aa18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 MAGED2Q9UNF1 606 aaPredicted RBP18.04■□□□□ 0.48
TNRC6A-209ENST00000562829 F5P12259 2224 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 FANCMQ8IYD8 2048 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 SHISA7A6NL88 538 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 CCNE1P24864 410 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 GPR15P49685 360 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 FCHO2Q0JRZ9 810 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 ZNF528Q3MIS6 628 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 INTS6LQ5JSJ4 861 aaKnown RBP18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 TSSK4Q6SA08 328 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 NELFCDQ8IXH7 590 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 STKLD1Q8NE28 680 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 OR5B17Q8NGF7 314 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 ZFYVE19Q96K21 471 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 ACBD6Q9BR61 282 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 KIAA1586Q9HCI6 787 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 GDAP2Q9NXN4 497 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 PCDHA7Q9UN72 937 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 VPS13AQ96RL7 3174 aa18.03■□□□□ 0.48
TNRC6A-209ENST00000562829 PTPRJQ12913 1337 aa18.02■□□□□ 0.48
TNRC6A-209ENST00000562829 ARNTLO00327 626 aa18.02■□□□□ 0.48
TNRC6A-209ENST00000562829 CLIC2O15247 247 aa18.02■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms