RNA–Protein interactions for RNA: ENST00000562680.5

TCF4-216, Transcript of transcription factor 4, humanhuman

TSL 1 (best)

Gene TCF4, Length 5,733 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-216ENST00000562680 I3L4J1 428 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 TULP2O00295 520 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ZBTB39O15060 712 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 TOMM70O94826 608 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PRKAR2AP13861 404 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 HNRNPH3P31942 346 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 OR1G1P47890 313 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 KPNA2P52292 529 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 CDH6P55285 790 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 BASP1P80723 227 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 MCL1Q07820 350 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 SNX1Q13596 522 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PTGISQ16647 500 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 SUGP1Q8IWZ8 645 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 REXO1L1PQ8IX06 675 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 TRAPPC12Q8WVT3 735 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 TMEM176AQ96HP8 235 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 FAXDC2Q96IV6 333 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 WDR24Q96S15 920 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 CCDC68Q9H2F9 335 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 MID2Q9UJV3 735 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 MTSS1O43312 755 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 B3GAT3O94766 335 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 YY1P25490 414 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 GRM5P41594 1212 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 RPL10AP62906 217 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 CENPCQ03188 943 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 KRT17Q04695 432 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 NR1H3Q13133 447 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 UGCGQ16739 394 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 BSPRYQ5W0U4 402 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 C11orf63Q6NUN7 778 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 MFSD14AQ96MC6 490 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 PURBQ96QR8 312 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 NTPCRQ9BSD7 190 aaKnown RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 AP1M1Q9BXS5 423 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 ARHGAP20Q9P2F6 1191 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.94□□□□□ -1.14
TCF4-216ENST00000562680 ALG6Q9Y672 507 aa7.94□□□□□ -1.14
TCF4-216ENST00000562680 MYH1P12882 1939 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 TMEM150BA6NC51 233 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 LRRIQ3A6PVS8 624 aaPredicted RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 ANKRD63C9JTQ0 380 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 ARL2P36404 184 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CASP5P51878 434 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CFAP157Q5JU67 520 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CDR2LQ86X02 465 aaPredicted RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 IFNL1Q8IU54 200 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 WDR75Q8IWA0 830 aaKnown RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 ADGRF2Q8IZF7 708 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 C1orf131Q8NDD1 294 aaKnown RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 TPCN2Q8NHX9 752 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 SH3TC2Q8TF17 1288 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CPA5Q8WXQ8 436 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 SPDL1Q96EA4 605 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 SLITRK1Q96PX8 696 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CDT1Q9H211 546 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 PCDHA2Q9Y5H9 948 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 MAD1L1Q9Y6D9 718 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CYB561D2O14569 222 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 APOL1O14791 398 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 GIPC1O14908 333 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 PJA2O43164 708 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 SEPT4O43236 478 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 TADA3O75528 432 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CA4P22748 312 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 GRIK1P39086 918 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 ALDH7A1P49419 539 aaKnown RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 SOX10P56693 466 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 ZACNQ401N2 412 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 HEATR6Q6AI08 1181 aaKnown RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 SLC30A9Q6PML9 568 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 STKLD1Q8NE28 680 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 NKX2-3Q8TAU0 364 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 RNF25Q96BH1 459 aaPredicted RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 FRMD8Q9BZ67 464 aaPredicted RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 DHX35Q9H5Z1 703 aaKnown RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 PSMD3O43242 534 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 TGFB1I1O43294 461 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 PHF2O75151 1096 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 JAG1P78504 1218 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 ROR1Q01973 937 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 ECM1Q16610 540 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CLEC16AQ2KHT3 1053 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 ZNF662Q6ZS27 426 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 UBE2Q1Q7Z7E8 422 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 LRRC52Q8N7C0 313 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 BATF3Q9NR55 127 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 ITGB1BP2Q9UKP3 347 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 TRIM66O15016 1216 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 GHRHRQ02643 423 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 MAP7Q14244 749 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 HSDL1Q3SXM5 330 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 KIAA1755Q5JYT7 1200 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 OLFML2BQ68BL8 750 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 GJB7Q6PEY0 223 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 SLC30A5Q8TAD4 765 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CPB2Q96IY4 423 aa7.93□□□□□ -1.14
TCF4-216ENST00000562680 CNOT10Q9H9A5 744 aaKnown RBP7.93□□□□□ -1.14
TCF4-216ENST00000562680 PCSK1NQ9UHG2 260 aa7.93□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms