RNA–Protein interactions for RNA: ENST00000561691.5

TUBGCP4-202, Transcript of tubulin gamma complex associated protein 4, humanhuman

TSL 1 (best)

Gene TUBGCP4, Length 1,928 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBGCP4-202ENST00000561691 NPTXRO95502 500 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 MYL3P08590 195 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 PYGMP11217 842 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 GJA9P57773 515 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZNF252P-AS1Q0IIN9 211 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 TRIM32Q13049 653 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SNX17Q15036 470 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SNCBQ16143 134 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 KCTD19Q17RG1 926 aaPredicted RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 TMEM132AQ24JP5 1023 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 DCAF4L1Q3SXM0 396 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 C8orf74Q6P047 294 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 DENND1BQ6P3S1 775 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 CCDC13Q8IYE1 715 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SLC4A11Q8NBS3 891 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 MICAL1Q8TDZ2 1067 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 CASKIN2Q8WXE0 1202 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SEC14L1Q92503 715 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SNX27Q96L92 541 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 PLCD4Q9BRC7 762 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 C11orf70Q9BRQ4 267 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 HERPUD2Q9BSE4 406 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SELENOOQ9BVL4 669 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 GCOM2Q9BZD3 368 aaPredicted RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 WNT8AQ9H1J5 351 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 RABEP2Q9H5N1 569 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 NME7Q9Y5B8 376 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 RALGAPA2Q2PPJ7 1873 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 CENPFP49454 3210 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SCN10AQ9Y5Y9 1956 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 TCRBV7S2A1N4TA0A589 114 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 O00370 1275 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 NDUFAB1O14561 156 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 PPEF2O14830 753 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SART1O43290 800 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 CILPO75339 1184 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 GJB6O95452 261 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 LSM8O95777 96 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 FGGP02679 453 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 EIF4BP23588 611 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 POLR2BP30876 1174 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 ATICP31939 592 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 NSFP46459 744 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 CARSP49589 748 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 LACTBP83111 547 aaPredicted RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 TMEM132DQ14C87 1099 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 ZNF394Q53GI3 561 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SLC27A1Q6PCB7 646 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 KLHL7Q8IXQ5 586 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 WNT8BQ93098 351 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 ACAP3Q96P50 834 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 DDX47Q9H0S4 455 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 SNTG2Q9NY99 539 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 ADAM22Q9P0K1 906 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 NXF1Q9UBU9 619 aaKnown RBP10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 ANAPC7Q9UJX3 599 aa10.84□□□□□ -0.67
TUBGCP4-202ENST00000561691 TRIP12Q14669 1992 aaPredicted RBP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 ESYT3A0FGR9 886 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 GOLGA6BA6NDN3 693 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 CCDC188H7C350 402 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 KRIT1O00522 736 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 PROSCO94903 275 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 HEXIM1O94992 359 aaKnown RBP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 SNUPNO95149 360 aaKnown RBP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 AKR1A1P14550 325 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 EZRP15311 586 aaKnown RBP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 CYP3A5P20815 502 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 TNNC1P63316 161 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 CDC42EP1Q00587 391 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 INCA1Q0VD86 236 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 PCBP1Q15365 356 aaKnown RBP eCLIP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 WDR72Q3MJ13 1102 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 XKR4Q5GH76 650 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 ZNF667Q5HYK9 610 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 NT5DC4Q86YG4 428 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 PARP9Q8IXQ6 854 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 PRELID2Q8N945 189 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 C1orf131Q8NDD1 294 aaKnown RBP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 TRIM11Q96F44 468 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 DDX27Q96GQ7 796 aaKnown RBP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 AP5M1Q9H0R1 490 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 RNF39Q9H2S5 420 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 NXF3Q9H4D5 531 aaKnown RBP10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 PLEKHA5Q9HAU0 1116 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 CNTN3Q9P232 1028 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 TJP2Q9UDY2 1190 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 ITGA11Q9UKX5 1188 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 AGAP1Q9UPQ3 857 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 DERAQ9Y315 318 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 HES2Q9Y543 173 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 KAT6AQ92794 2004 aa10.83□□□□□ -0.68
TUBGCP4-202ENST00000561691 TMEM191CA6NGB0 347 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 ADAMTS4O75173 837 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 KRT19P08727 400 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 PAEPP09466 180 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 FAM153BP0C7A2 387 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 GCKP35557 465 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 PSMC4P43686 418 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 TAS2R40P59535 323 aa10.82□□□□□ -0.68
TUBGCP4-202ENST00000561691 OGDHQ02218 1023 aa10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms