RNA–Protein interactions for RNA: ENST00000560509.5

BLM-208, Transcript of Bloom syndrome RecQ like helicase, humanhuman

TSL 1 (best) BASIC

Gene BLM, Length 3,966 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BLM-208ENST00000560509 NPTX2P47972 431 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SCNN1GP51170 649 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 RIPPLY3P57055 190 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TRIM32Q13049 653 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 E4F1Q66K89 784 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 ARMCX5Q6P1M9 558 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TRIM65Q6PJ69 517 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CORO6Q6QEF8 472 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CLEC2AQ6UVW9 174 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 KDELC1Q6UW63 502 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SEZ6L2Q6UXD5 910 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 DHX32Q7L7V1 743 aaKnown RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 SH3RF1Q7Z6J0 888 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TAGAPQ8N103 731 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 LINC00301Q8NCQ3 95 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 LRRN4CLQ8ND94 238 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CCDC148Q8NFR7 591 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SPATA20Q8TB22 786 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TRAF3IP1Q8TDR0 691 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 LMBR1Q8WVP7 490 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TRAPPC12Q8WVT3 735 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 HSPH1Q92598 858 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 BRF1Q92994 677 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 HES6Q96HZ4 224 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ZNF845Q96IR2 970 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 GPATCH1Q9BRR8 931 aaKnown RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 CCDC106Q9BWC9 280 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ADAM33Q9BZ11 813 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SCAND2PQ9GZW5 306 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 NUP62CLQ9H1M0 184 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SUV39H2Q9H5I1 410 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 NDOR1Q9UHB4 597 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TUBE1Q9UJT0 475 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CAB39Q9Y376 341 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 COL1A1P02452 1464 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 NHSQ6T4R5 1651 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ZNF646O15015 1829 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 A0A087WWV3 80 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 A0A1W2PQ27 194 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 A0A1W2PQ64 194 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 A0A1W2PQD8 194 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 NOP56O00567 594 aaKnown RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 AP3D1O14617 1153 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 RETP07949 1114 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 MAPK3P27361 379 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 RNF144AP50876 292 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 FCGRTP55899 365 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 MRPS5P82675 430 aaKnown RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 DMWDQ09019 674 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TRPC3Q13507 836 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CUL4BQ13620 913 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SLC14A2Q15849 920 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 PTPRNQ16849 979 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 OR7E24Q6IFN5 339 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 C11orf88Q6PI97 169 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 NUP54Q7Z3B4 507 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TXNRD3Q86VQ6 643 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 MFN1Q8IWA4 741 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ZNF619Q8N2I2 560 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ATP6V0A1Q93050 837 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 LPPQ93052 612 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ZNF653Q96CK0 615 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 EYA3Q99504 573 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ANKRD2Q9GZV1 360 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 STMN4Q9H169 189 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 PARVGQ9HBI0 331 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 GPRC5BQ9NZH0 403 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 WDR35Q9P2L0 1181 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 THEGQ9P2T0 379 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 PPARGC1AQ9UBK2 798 aaKnown RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 PCDHA7Q9UN72 937 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 LY75O60449 1722 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CDK5RAP2Q96SN8 1893 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 DUOX1Q9NRD9 1551 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ZMYM6O95789 1325 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 AP1G1O43747 822 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TMEM127O75204 238 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 ERLIN1O75477 346 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 TRPA1O75762 1119 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 PDE8BO95263 885 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 MAP3K6O95382 1288 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 COL6A2P12110 1019 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 FOSL2P15408 326 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 EN2P19622 333 aaPredicted RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 FGFR2P21802 821 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 PTPREP23469 700 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 NFKBIAP25963 317 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 PHKA1P46020 1223 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 AP3M2P53677 418 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 HADHBP55084 474 aaKnown RBP3.91□□□□□ -1.78
BLM-208ENST00000560509 KRT85P78386 507 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CBX3Q13185 183 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 STIM1Q13586 685 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SPARCL1Q14515 664 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SEMA3AQ14563 771 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 LRRC14Q15048 493 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 CAMK4Q16566 473 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 KRBOX4Q5JUW0 171 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 NT5DC1Q5TFE4 455 aa3.91□□□□□ -1.78
BLM-208ENST00000560509 SNX30Q5VWJ9 437 aa3.91□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms