RNA–Protein interactions for RNA: ENST00000559715.1

HERC1-204, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 2

Gene HERC1, Length 495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-204ENST00000559715 EFCAB13Q8IY85 973 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 ZSWIM2Q8NEG5 633 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 SMG9Q9H0W8 520 aaKnown RBP12.01□□□□□ -0.49
HERC1-204ENST00000559715 ATXN3LQ9H3M9 355 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 ST6GALNAC4Q9H4F1 302 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 SLITRK6Q9H5Y7 841 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 TASP1Q9H6P5 420 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 RPF1Q9H9Y2 349 aaKnown RBP12.01□□□□□ -0.49
HERC1-204ENST00000559715 FBRSL1Q9HCM7 1045 aaKnown RBP12.01□□□□□ -0.49
HERC1-204ENST00000559715 HPS4Q9NQG7 708 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 TMLHEQ9NVH6 421 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 CDV3Q9UKY7 258 aaKnown RBP12.01□□□□□ -0.49
HERC1-204ENST00000559715 CCL26Q9Y258 94 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.01□□□□□ -0.49
HERC1-204ENST00000559715 FREM2Q5SZK8 3169 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 NUP205Q92621 2012 aa12.01□□□□□ -0.49
HERC1-204ENST00000559715 HELZP42694 1942 aaKnown RBP12□□□□□ -0.49
HERC1-204ENST00000559715 H0YCG3 227 aa12□□□□□ -0.49
HERC1-204ENST00000559715 SLC26A4O43511 780 aa12□□□□□ -0.49
HERC1-204ENST00000559715 EXTL3O43909 919 aa12□□□□□ -0.49
HERC1-204ENST00000559715 TRAK2O60296 914 aa12□□□□□ -0.49
HERC1-204ENST00000559715 CNR2P34972 360 aa12□□□□□ -0.49
HERC1-204ENST00000559715 LIG4P49917 911 aa12□□□□□ -0.49
HERC1-204ENST00000559715 SIM2Q14190 667 aaPredicted RBP12□□□□□ -0.49
HERC1-204ENST00000559715 KYAT1Q16773 422 aa12□□□□□ -0.49
HERC1-204ENST00000559715 SLC39A12Q504Y0 691 aa12□□□□□ -0.49
HERC1-204ENST00000559715 TMEM196Q5HYL7 178 aa12□□□□□ -0.49
HERC1-204ENST00000559715 WSCD1Q658N2 575 aa12□□□□□ -0.49
HERC1-204ENST00000559715 FSTL4Q6MZW2 842 aa12□□□□□ -0.49
HERC1-204ENST00000559715 C1orf228Q6PIY5 440 aa12□□□□□ -0.49
HERC1-204ENST00000559715 PRR23CQ6ZRP0 262 aa12□□□□□ -0.49
HERC1-204ENST00000559715 USP49Q70CQ1 688 aa12□□□□□ -0.49
HERC1-204ENST00000559715 WDR5BQ86VZ2 330 aa12□□□□□ -0.49
HERC1-204ENST00000559715 CD302Q8IX05 232 aa12□□□□□ -0.49
HERC1-204ENST00000559715 FAM160A2Q8N612 972 aaPredicted RBP12□□□□□ -0.49
HERC1-204ENST00000559715 BPIFB1Q8TDL5 484 aa12□□□□□ -0.49
HERC1-204ENST00000559715 CSGALNACT1Q8TDX6 532 aa12□□□□□ -0.49
HERC1-204ENST00000559715 EZH1Q92800 747 aaPredicted RBP12□□□□□ -0.49
HERC1-204ENST00000559715 SECISBP2LQ93073 1101 aaKnown RBP12□□□□□ -0.49
HERC1-204ENST00000559715 TMX3Q96JJ7 454 aa12□□□□□ -0.49
HERC1-204ENST00000559715 AK8Q96MA6 479 aa12□□□□□ -0.49
HERC1-204ENST00000559715 PKMYT1Q99640 499 aa12□□□□□ -0.49
HERC1-204ENST00000559715 MSTO1Q9BUK6 570 aa12□□□□□ -0.49
HERC1-204ENST00000559715 ASB7Q9H672 318 aa12□□□□□ -0.49
HERC1-204ENST00000559715 PARVGQ9HBI0 331 aa12□□□□□ -0.49
HERC1-204ENST00000559715 RXFP3Q9NSD7 469 aa12□□□□□ -0.49
HERC1-204ENST00000559715 POLR3BQ9NW08 1133 aaPredicted RBP12□□□□□ -0.49
HERC1-204ENST00000559715 GMEB2Q9UKD1 530 aa12□□□□□ -0.49
HERC1-204ENST00000559715 DERAQ9Y315 318 aa12□□□□□ -0.49
HERC1-204ENST00000559715 C2CD2Q9Y426 696 aa12□□□□□ -0.49
HERC1-204ENST00000559715 MYOFQ9NZM1 2061 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 GON4LQ3T8J9 2241 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 EIF5BO60841 1220 aaKnown RBP11.99□□□□□ -0.49
HERC1-204ENST00000559715 TADA3O75528 432 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 HAPLN1P10915 354 aaPredicted RBP11.99□□□□□ -0.49
HERC1-204ENST00000559715 ODC1P11926 461 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 PLCG1P19174 1290 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 SCP2P22307 547 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 PAX3P23760 479 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 RAP1GAPP47736 663 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 KPNA1P52294 538 aaPredicted RBP11.99□□□□□ -0.49
HERC1-204ENST00000559715 KCNA1Q09470 495 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 LRRC32Q14392 662 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 TMEM132DQ14C87 1099 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 KARSQ15046 597 aaKnown RBP11.99□□□□□ -0.49
HERC1-204ENST00000559715 NAIF1Q69YI7 327 aaPredicted RBP11.99□□□□□ -0.49
HERC1-204ENST00000559715 HEATR6Q6AI08 1181 aaKnown RBP11.99□□□□□ -0.49
HERC1-204ENST00000559715 MCTP1Q6DN14 999 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 PRR23BQ6ZRT6 265 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 CMTM8Q8IZV2 173 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 SYNPOQ8N3V7 929 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 MYCT1Q8N699 235 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 NETO1Q8TDF5 533 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 RAD54LQ92698 747 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 USP13Q92995 863 aaPredicted RBP11.99□□□□□ -0.49
HERC1-204ENST00000559715 BICD1Q96G01 975 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 FAM84AQ96KN4 292 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 GKN1Q9NS71 199 aa11.99□□□□□ -0.49
HERC1-204ENST00000559715 LOC105378220A0A1B0GUY1 285 aaPredicted RBP11.98□□□□□ -0.49
HERC1-204ENST00000559715 K7ENM7 598 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 CYB561D2O14569 222 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 TRDMT1O14717 391 aaKnown RBP11.98□□□□□ -0.49
HERC1-204ENST00000559715 XPOTO43592 962 aaKnown RBP11.98□□□□□ -0.49
HERC1-204ENST00000559715 FGF19O95750 216 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 GJB2P29033 226 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 MATR3P43243 847 aaKnown RBP eCLIP11.98□□□□□ -0.49
HERC1-204ENST00000559715 TUFMP49411 452 aaKnown RBP11.98□□□□□ -0.49
HERC1-204ENST00000559715 GPR15P49685 360 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 NLRP12P59046 1061 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 POU5F1Q01860 360 aaKnown RBP11.98□□□□□ -0.49
HERC1-204ENST00000559715 DHX8Q14562 1220 aaKnown RBP11.98□□□□□ -0.49
HERC1-204ENST00000559715 PPP2R5DQ14738 602 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 CCDC142Q17RM4 750 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 ITPRIPL2Q3MIP1 535 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 TRIM68Q6AZZ1 485 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 ARMCX5Q6P1M9 558 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 ZNF720Q7Z2F6 126 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 ITIH5Q86UX2 942 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 YAF2Q8IY57 180 aa11.98□□□□□ -0.49
HERC1-204ENST00000559715 STKLD1Q8NE28 680 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms