RNA–Protein interactions for RNA: ENST00000559016.1

COPS2-206, Transcript of COP9 signalosome subunit 2, humanhuman

TSL 4

Gene COPS2, Length 570 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS2-206ENST00000559016 AGAP1Q9UPQ3 857 aa9.11□□□□□ -0.95
COPS2-206ENST00000559016 SBDSQ9Y3A5 250 aaKnown RBP eCLIP9.11□□□□□ -0.95
COPS2-206ENST00000559016 GOLGA6L10A0A0M3HER8 536 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 GPR182O15218 404 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 TLR3O15455 904 aaKnown RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 RNF40O75150 1001 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 TFRCP02786 760 aaKnown RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 HMGCRP04035 888 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 WEE2P0C1S8 567 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 RHOXF2BP0C7M4 288 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 COMTP21964 271 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 PAX3P23760 479 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 PEX5P50542 639 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 APLP1P51693 650 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 RAD23BP54727 409 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 SNX16P57768 344 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 C2orf54Q08AI8 447 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 MESDQ14696 234 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 CNGA2Q16280 664 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 NBPF20Q3BBV1 942 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 CCSAPQ6IQ19 270 aaPredicted RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 DPH6Q7L8W6 267 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 MAATS1Q7Z4T9 603 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 RNF180Q86T96 592 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 UNC93AQ86WB7 457 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 DNAAF5Q86Y56 855 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 IFT20Q8IY31 132 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 CCDC26Q8TAB7 109 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 MAIP1Q8WWC4 291 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 LENG1Q96BZ8 264 aaPredicted RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 TMEM176AQ96HP8 235 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 FAM84AQ96KN4 292 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 ZNF560Q96MR9 790 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 PPP1R16BQ96T49 567 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 PNKPQ96T60 521 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 PSMB7Q99436 277 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 RHOXF2Q9BQY4 288 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 TSEN34Q9BSV6 310 aaKnown RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 TRAIPQ9BWF2 469 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 ARHGAP39Q9C0H5 1083 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 SNTG2Q9NY99 539 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 OGFRQ9NZT2 677 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 NXF1Q9UBU9 619 aaKnown RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 IP6K2Q9UHH9 426 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 PACSIN2Q9UNF0 486 aaPredicted RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 PIN4Q9Y237 131 aaKnown RBP9.1□□□□□ -0.95
COPS2-206ENST00000559016 GINS2Q9Y248 185 aa9.1□□□□□ -0.95
COPS2-206ENST00000559016 SCN1AP35498 2009 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 MYADML2A6NDP7 307 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 MOXD2PA6NHM9 499 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 SPOPO43791 374 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 RECQL4O94761 1208 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 PROSCO94903 275 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 ASGR1P07306 291 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 CD58P19256 250 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 FGFR4P22455 802 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 RRM1P23921 792 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 RWDD2BP57060 319 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 VSNL1P62760 191 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 MGAT3Q09327 533 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 TMEM62Q0P6H9 643 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 PTK7Q13308 1070 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 MAMLD1Q13495 774 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 ACAP1Q15027 740 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 LONRF2Q1L5Z9 754 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 FAM26DQ5JW98 314 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 BEND6Q5SZJ8 279 aaPredicted RBP9.09□□□□□ -0.95
COPS2-206ENST00000559016 UBXN11Q5T124 520 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 SEL1L2Q5TEA6 688 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 ZNF787Q6DD87 383 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 CXCL17Q6UXB2 119 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 CCNI2Q6ZMN8 369 aaPredicted RBP9.09□□□□□ -0.95
COPS2-206ENST00000559016 HDXQ7Z353 690 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 ERICH1Q86X53 443 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 FEZF2Q8TBJ5 459 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 WHAMMQ8TF30 809 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 TMEM40Q8WWA1 233 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 CPA5Q8WXQ8 436 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 MS4A14Q96JA4 679 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 PKNOX2Q96KN3 472 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 RNPC3Q96LT9 517 aaKnown RBP9.09□□□□□ -0.95
COPS2-206ENST00000559016 LRRC1Q9BTT6 524 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 NT5C1AQ9BXI3 368 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 ACBD3Q9H3P7 528 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 VIPAS39Q9H9C1 493 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 RBM12Q9NTZ6 932 aaKnown RBP9.09□□□□□ -0.95
COPS2-206ENST00000559016 SLC38A7Q9NVC3 462 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.09□□□□□ -0.95
COPS2-206ENST00000559016 RNF186Q9NXI6 227 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 GDAP2Q9NXN4 497 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 FAM53CQ9NYF3 392 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 STIM2Q9P246 746 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 DDX20Q9UHI6 824 aaKnown RBP9.09□□□□□ -0.95
COPS2-206ENST00000559016 ANAPC7Q9UJX3 599 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 L1RE1Q9UN81 338 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 NOC2LQ9Y3T9 749 aaKnown RBP9.09□□□□□ -0.95
COPS2-206ENST00000559016 THSD7BQ9C0I4 1608 aa9.09□□□□□ -0.95
COPS2-206ENST00000559016 FRMPD3Q5JV73 1810 aa9.08□□□□□ -0.96
COPS2-206ENST00000559016 SMIM28A0A1B0GU29 152 aa9.08□□□□□ -0.96
COPS2-206ENST00000559016 TCRBV5S1A1TA0A578 114 aa9.08□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms