RNA–Protein interactions for RNA: ENST00000558471.5

LRRC28-206, Transcript of leucine rich repeat containing 28, humanhuman

TSL 3

Gene LRRC28, Length 793 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-206ENST00000558471 LIN9Q5TKA1 542 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 CCDC149Q6ZUS6 474 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 CREBRFQ8IUR6 639 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 ATAD1Q8NBU5 361 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 FBXL13Q8NEE6 735 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 PRKD2Q9BZL6 878 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 SDCBP2Q9H190 292 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 CRISPLD1Q9H336 500 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 APOBEC3GQ9HC16 384 aaKnown RBP13.38□□□□□ -0.27
LRRC28-206ENST00000558471 TMLHEQ9NVH6 421 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 RAB20Q9NX57 234 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 ZDHHC7Q9NXF8 308 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 MAFFQ9ULX9 164 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 FAM50BQ9Y247 325 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 COQ4Q9Y3A0 265 aa13.38□□□□□ -0.27
LRRC28-206ENST00000558471 MTMR11A4FU01 709 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 PRRG1O14668 218 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 CCL16O15467 120 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 PDGFRBP09619 1106 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 MTHFRP42898 656 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 RAP1GAPP47736 663 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 NOP14P78316 857 aaKnown RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 TSPY1Q01534 308 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 DUSP4Q13115 394 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 CBX2Q14781 532 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 STX1AQ16623 288 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 INTS6LQ5JSJ4 861 aaKnown RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 SCARA5Q6ZMJ2 495 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 C11orf57Q6ZUT1 292 aaPredicted RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 RTL10Q7L3V2 364 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 DCP1BQ8IZD4 617 aaKnown RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 OR6B3Q8NGW1 331 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 ENOX1Q8TC92 643 aaKnown RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 SMG7Q92540 1137 aaKnown RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 CNOT6LQ96LI5 555 aaKnown RBP13.37□□□□□ -0.27
LRRC28-206ENST00000558471 RIPOR3Q96MK2 946 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 PKMYT1Q99640 499 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 IMPG2Q9BZV3 1241 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 SNX25Q9H3E2 840 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 SMYD3Q9H7B4 428 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 ANO10Q9NW15 660 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 GTF3C4Q9UKN8 822 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 SLC27A5Q9Y2P5 690 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 C5orf42Q9H799 3197 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 NOTCH4Q99466 2003 aa13.37□□□□□ -0.27
LRRC28-206ENST00000558471 MYBPHLA2RUH7 354 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 ATP2C2O75185 946 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 HNRNPA1P09651 372 aaKnown RBP eCLIP13.36□□□□□ -0.27
LRRC28-206ENST00000558471 PCSK1P29120 753 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 HOXA9P31269 272 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 ASPAP45381 313 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 TYRO3Q06418 890 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 KCNH2Q12809 1159 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 CCDC142Q17RM4 750 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 FAM171BQ6P995 826 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 CYP26C1Q6V0L0 522 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 TTC9BQ8N6N2 239 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 CCDC150Q8NCX0 1101 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 TATDN2Q93075 761 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 NECAB3Q96P71 396 aaPredicted RBP13.36□□□□□ -0.27
LRRC28-206ENST00000558471 SYT15Q9BQS2 421 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 RHOBTB2Q9BYZ6 727 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 POMKQ9H5K3 350 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 THAP9Q9H5L6 903 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 PIDD1Q9HB75 910 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 CRTAC1Q9NQ79 661 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 CDH9Q9ULB4 789 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 UTP18Q9Y5J1 556 aaKnown RBP eCLIP13.36□□□□□ -0.27
LRRC28-206ENST00000558471 INSL5Q9Y5Q6 135 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 DENND4AQ7Z401 1863 aa13.36□□□□□ -0.27
LRRC28-206ENST00000558471 A8MXQ7 604 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 PMM2O15305 246 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 LRG1P02750 347 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 AFPP02771 609 aaKnown RBP13.35□□□□□ -0.27
LRRC28-206ENST00000558471 P4HA1P13674 534 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 PSMC1P62191 440 aaKnown RBP13.35□□□□□ -0.27
LRRC28-206ENST00000558471 SMARCB1Q12824 385 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 NFE2Q16621 373 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-206ENST00000558471 HSP90AA4PQ58FG1 418 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 WDR44Q5JSH3 913 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 ADAMTS19Q8TE59 1207 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 C2orf15Q8WU43 125 aaKnown RBP13.35□□□□□ -0.27
LRRC28-206ENST00000558471 NECTIN4Q96NY8 510 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 LPIN3Q9BQK8 851 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 BCO2Q9BYV7 579 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 NIF3L1Q9GZT8 377 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 DNAJC25Q9H1X3 360 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 DPEP3Q9H4B8 488 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 SAMSN1Q9NSI8 373 aaKnown RBP13.35□□□□□ -0.27
LRRC28-206ENST00000558471 ABI2Q9NYB9 513 aaPredicted RBP13.35□□□□□ -0.27
LRRC28-206ENST00000558471 NFE2L3Q9Y4A8 694 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 PCDHB5Q9Y5E4 795 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 PTPRDP23468 1912 aa13.35□□□□□ -0.27
LRRC28-206ENST00000558471 P4HA2O15460 535 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 N4BP1O75113 896 aaKnown RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 XYLBO75191 536 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 SOAT2O75908 522 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 LETM1O95202 739 aaPredicted RBP13.34□□□□□ -0.27
LRRC28-206ENST00000558471 POU2F2P09086 479 aa13.34□□□□□ -0.27
LRRC28-206ENST00000558471 PTPN1P18031 435 aaKnown RBP13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms