RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 ZNF579Q8NAF0 562 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 PCYOX1LQ8NBM8 494 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 UXS1Q8NBZ7 420 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 PCDHB7Q9Y5E2 793 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 KCNJ1P48048 391 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 ALDH6A1Q02252 535 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 FMR1Q06787 632 aaKnown RBP eCLIP14.55□□□□□ -0.083e-6■■■■□ 22.5
SPG11-210ENST00000558319 OASLQ15646 514 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 TRIM71Q2Q1W2 868 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 DCAF6Q58WW2 860 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 ISLR2Q6UXK2 745 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 BARGINQ6ZT62 677 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 FAM167AQ96KS9 214 aa14.55□□□□□ -0.08
SPG11-210ENST00000558319 DDX18Q9NVP1 670 aaKnown RBP14.55□□□□□ -0.08
SPG11-210ENST00000558319 hCG_1984214I3L0E3 225 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 RTN2O75298 545 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 RHOBTB1O94844 696 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ALDH1A1P00352 501 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ACADSP16219 412 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ZNF713Q8N859 430 aaPredicted RBP14.54□□□□□ -0.08
SPG11-210ENST00000558319 CPB2Q96IY4 423 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 SELENONQ9NZV5 590 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 TMEM191CA6NGB0 347 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ERVV-1B6SEH8 477 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 PSMC3P17980 439 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 TFE3P19532 575 aaPredicted RBP14.54□□□□□ -0.08
SPG11-210ENST00000558319 SCTRP47872 440 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 AP3B2Q13367 1082 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.54□□□□□ -0.08
SPG11-210ENST00000558319 CDH24Q86UP0 819 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ATPAF2Q8N5M1 289 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 GPR108Q9NPR9 543 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 DONSONQ9NYP3 566 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 NPHP4O75161 1426 aaPredicted RBP14.54□□□□□ -0.08
SPG11-210ENST00000558319 CDH16O75309 829 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 KPNB1Q14974 876 aaKnown RBP14.54□□□□□ -0.08
SPG11-210ENST00000558319 MROH9Q5TGP6 573 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 KCNB2Q92953 911 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 TBC1D22BQ9NU19 505 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ST13P50502 369 aaKnown RBP14.54□□□□□ -0.08
SPG11-210ENST00000558319 SLC29A2Q14542 456 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 DUOXA2Q1HG44 320 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 AKIRIN2Q53H80 203 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 UTS2BQ765I0 119 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ARMCX6Q7L4S7 300 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 OSBPL8Q9BZF1 889 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ITIH6Q6UXX5 1313 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 ATP9AO75110 1047 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 RPS6KA5O75582 802 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 GOLGA7BQ2TAP0 167 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 C10orf120Q5SQS8 335 aa14.54□□□□□ -0.08
SPG11-210ENST00000558319 CSDE1O75534 798 aaKnown RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 ITGA8P53708 1063 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 MAPK10P53779 464 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 CENPPQ6IPU0 288 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 NOL6Q9H6R4 1146 aaKnown RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 METTL5Q9NRN9 209 aaKnown RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 GGA3Q9NZ52 723 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 HEY2Q9UBP5 337 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 SAMD9Q5K651 1589 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 EEF2KO00418 725 aaKnown RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 CDC25CP30307 473 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 MAPK9P45984 424 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 RAP1GAPP47736 663 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 DDX39BQ13838 428 aaKnown RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 TTC39BQ5VTQ0 682 aaPredicted RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 PRR23CQ6ZRP0 262 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 PTPRN2Q92932 1015 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 PAPOLBQ9NRJ5 636 aaKnown RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 SMAPO00193 183 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 LIFRP42702 1097 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 MAGEA4P43358 317 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 KRT76Q01546 638 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 MTHFD1LQ6UB35 978 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 NLRP9Q7RTR0 991 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 KIF2CQ99661 725 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 SH3GLB2Q9NR46 395 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 ARHGEF38Q9NXL2 777 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 ZFYVE16Q7Z3T8 1539 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 ABCA5Q8WWZ7 1642 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 ZNF23P17027 643 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 SOX6P35712 828 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 ARHGEF7Q14155 803 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 NFIXQ14938 502 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 TMEM132DQ14C87 1099 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 BRINP3Q76B58 766 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 ZKSCAN4Q969J2 545 aaPredicted RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 REXO4Q9GZR2 422 aaKnown RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 GPBP1L1Q9HC44 474 aaPredicted RBP14.53□□□□□ -0.08
SPG11-210ENST00000558319 BARHL2Q9NY43 387 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 PHTF1Q9UMS5 762 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 MAGI2Q86UL8 1455 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 HSMCR30P0CW71 290 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 EFCAB12Q6NXP0 572 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 E2F7Q96AV8 911 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 RNF19AQ9NV58 838 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 ZDHHC9Q9Y397 364 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 SNX13Q9Y5W8 968 aa14.53□□□□□ -0.08
SPG11-210ENST00000558319 NDUFS3O75489 264 aa14.52□□□□□ -0.08
SPG11-210ENST00000558319 NPM3O75607 178 aaKnown RBP14.52□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms