RNA–Protein interactions for RNA: ENST00000558059.5

SNRPA1-206, Transcript of small nuclear ribonucleoprotein polypeptide A', humanhuman

TSL 2

Gene SNRPA1, Length 678 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPA1-206ENST00000558059 CYP2J2P51589 502 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 CLCN5P51795 746 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 CDR1P51861 262 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 GPC5P78333 572 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 CYP24A1Q07973 514 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 BFSP1Q12934 665 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 PSMD2Q13200 908 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 SNRNP35Q16560 246 aaKnown RBP9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 DUOXA2Q1HG44 320 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 CYP4A22Q5TCH4 519 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 CWF19L1Q69YN2 538 aaKnown RBP9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 IQCEQ6IPM2 695 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 PDZD4Q76G19 769 aaPredicted RBP9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 HS2ST1Q7LGA3 356 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 LIMS2Q7Z4I7 341 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 OSTM1Q86WC4 334 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 TMC8Q8IU68 726 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 THEM5Q8N1Q8 247 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 ELMOD1Q8N336 334 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 PDCL2Q8N4E4 241 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 TMEM105Q8N8V8 129 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 FSIP1Q8NA03 581 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 XXYLT1Q8NBI6 393 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 ANKRD36BP1Q96IX9 119 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 ZSWIM3Q96MP5 696 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 KXD1Q9BQD3 176 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 PLA2G2FQ9BZM2 168 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 GOLPH3LQ9H4A5 285 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 SLC2A4RGQ9NR83 387 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 TMLHEQ9NVH6 421 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 DMAC2Q9NW81 257 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 CGNQ9P2M7 1197 aaKnown RBP9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 HSFX1Q9UBD0 423 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 FBXL21Q9UKT6 434 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 L1RE1Q9UN81 338 aa9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 RIF1Q5UIP0 2472 aaKnown RBP9.45□□□□□ -0.9
SNRPA1-206ENST00000558059 PI15O43692 258 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 ECI2O75521 394 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 ZNF202O95125 648 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 TNNC2P02585 160 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 RPN1P04843 607 aaKnown RBP9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 MYL1P05976 194 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 KRT19P08727 400 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 MYL4P12829 197 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 GJA1P17302 382 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 FCARP24071 287 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 ALDH1A3P47895 512 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 EPHB3P54753 998 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 TCF15Q12870 199 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 DPYDQ12882 1025 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 PLD1Q13393 1074 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 PSMD6Q15008 389 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 SOWAHAQ2M3V2 549 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 FAM78AQ5JUQ0 283 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 TANGO2Q6ICL3 276 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 KRBA2Q6ZNG9 492 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 TRAPPC11Q7Z392 1133 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 DNAJB7Q7Z6W7 309 aaPredicted RBP9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 WDR49Q8IV35 697 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 SIX5Q8N196 739 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 TMEM86AQ8N2M4 240 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 TOP6BLQ8N6T0 577 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 LEMD2Q8NC56 503 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 SHKBP1Q8TBC3 707 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 GPR152Q8TDT2 470 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 TMEM174Q8WUU8 243 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 ZNF516Q92618 1163 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 PKMYT1Q99640 499 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 KCTD10Q9H3F6 313 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 MFSD1Q9H3U5 465 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 ASAH2Q9NR71 780 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 EXOC1Q9NV70 894 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 ASB3Q9Y575 518 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 SNX9Q9Y5X1 595 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 PTPRDP23468 1912 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 GREB1Q4ZG55 1949 aa9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 PTPRZ1P23471 2315 aaPredicted RBP9.44□□□□□ -0.9
SNRPA1-206ENST00000558059 ZFHX2Q9C0A1 2572 aaPredicted RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 MIA3Q5JRA6 1907 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 STK25O00506 426 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 GABRDO14764 452 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 HCRTO43612 131 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 EXOC3O60645 756 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 HUS1O60921 280 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 RHOBTB3O94955 611 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 CST3P01034 146 aaPredicted RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 DLATP10515 647 aaKnown RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 HAPLN1P10915 354 aaPredicted RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 ATF6P18850 670 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 TNNI1P19237 187 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 AOC1P19801 751 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 TUFMP49411 452 aaKnown RBP9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 NUCB2P80303 420 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 NHLH1Q02575 133 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 SMARCB1Q12824 385 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 MYO1EQ12965 1108 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 TEAD2Q15562 447 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 GAREM2Q75VX8 874 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 DPH6Q7L8W6 267 aa9.43□□□□□ -0.9
SNRPA1-206ENST00000558059 SLC9A9Q8IVB4 645 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms