RNA–Protein interactions for RNA: ENST00000557394.5

SUPT16H-207, Transcript of SPT16 homolog, facilitates chromatin remodeling subunit, humanhuman

TSL 2

Gene SUPT16H, Length 2,324 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT16H-207ENST00000557394 LBHD1Q9BQE6 289 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-207ENST00000557394 TRABDQ9H4I3 376 aa11.03□□□□□ -0.64
SUPT16H-207ENST00000557394 EBF3Q9H4W6 596 aa11.03□□□□□ -0.64
SUPT16H-207ENST00000557394 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-207ENST00000557394 ARPP21Q9UBL0 812 aaPredicted RBP11.03□□□□□ -0.64
SUPT16H-207ENST00000557394 PRELID1Q9Y255 219 aa11.03□□□□□ -0.64
SUPT16H-207ENST00000557394 NPHP3-ACAD11A0A0J9YXS1 232 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 VILLO15195 856 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 GAS8O95995 478 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 TNFAIP3P21580 790 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 YY1P25490 414 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 RPA3P35244 121 aaPredicted RBP11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 CD97P48960 835 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 ADARP55265 1226 aaKnown RBP11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 AP2B1P63010 937 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 MRPL28Q13084 256 aaKnown RBP11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 BTG3Q14201 252 aaPredicted RBP11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 TRMT5Q32P41 509 aaKnown RBP11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 USH1GQ495M9 461 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 B3GNT6Q6ZMB0 384 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 SATL1Q86VE3 508 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 PDSS2Q86YH6 399 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 RFWD2Q8NHY2 731 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 KIAA1586Q9HCI6 787 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 SSU72Q9NP77 194 aaKnown RBP11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 TIMMDC1Q9NPL8 285 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 ARHGEF4Q9NR80 690 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 TBCCD1Q9NVR7 557 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 NDE1Q9NXR1 346 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 HEY2Q9UBP5 337 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 ASIC3Q9UHC3 531 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 MKL2Q9ULH7 1088 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 PAIP2BQ9ULR5 123 aaKnown RBP11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 SLC30A1Q9Y6M5 507 aa11.02□□□□□ -0.64
SUPT16H-207ENST00000557394 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 PDXKO00764 312 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 ZNF862O60290 1169 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 CDK4P11802 303 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 BTF3P20290 206 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 GTF2H1P32780 548 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 HOXD13P35453 343 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 PGM1P36871 562 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 CETN2P41208 172 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 ACTR3P61158 418 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 KIF22Q14807 665 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 DRAP1Q14919 205 aaPredicted RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 KNOP1Q1ED39 458 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 DCAF17Q5H9S7 520 aaPredicted RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 OLFML2BQ68BL8 750 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 PHLDB2Q86SQ0 1253 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 PRUNE1Q86TP1 453 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 PALB2Q86YC2 1186 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 ZNF34Q8IZ26 560 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 ZNF276Q8N554 614 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 TMCO5AQ8N6Q1 288 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 PIP4K2CQ8TBX8 421 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 NMD3Q96D46 503 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 PRICKLE1Q96MT3 831 aaPredicted RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 OSBPL8Q9BZF1 889 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 C17orf75Q9HAS0 396 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 DNAJC17Q9NVM6 304 aaKnown RBP11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 NARFQ9UHQ1 456 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 ANAPC5Q9UJX4 755 aa11.02□□□□□ -0.65
SUPT16H-207ENST00000557394 KDM3AQ9Y4C1 1321 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CALUO43852 315 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 TBCAO75347 108 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 OR6B1O95007 311 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 INMTO95050 263 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 TDP2O95551 362 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 HNRNPCP07910 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CYP2D6P10635 497 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 GYS1P13807 737 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 VARSP26640 1264 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 GNALP38405 381 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 XIAPP98170 497 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CDK16Q00536 496 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 ASPHQ12797 758 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CYLC2Q14093 348 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 MAPK6Q16659 721 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CFAP157Q5JU67 520 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 REXO1Q8N1G1 1221 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 SYT2Q8N9I0 419 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 OR6Y1Q8NGX8 325 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 GAB3Q8WWW8 586 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 USP29Q9HBJ7 922 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 TRMT112Q9UI30 125 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 NEU2Q9Y3R4 380 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 OPHN1O60890 802 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 ZBED4O75132 1171 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 PLA2G4BP0C869 781 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 SMIM18P0DKX4 95 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 ESRRAP11474 423 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 UQCRBP14927 111 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CPA3P15088 417 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CASP5P51878 434 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 CTAG1AP78358 180 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 TFAP4Q01664 338 aa11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 TBL3Q12788 808 aaKnown RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 TAF1CQ15572 869 aaPredicted RBP11.01□□□□□ -0.65
SUPT16H-207ENST00000557394 TRAPPC3LQ5T215 181 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms