RNA–Protein interactions for RNA: ENST00000556203.1

ACTN1-217, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-217ENST00000556203 VNN1O95497 513 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 EPB41P11171 864 aaKnown RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 PTPN2P17706 415 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 WARSP23381 471 aaKnown RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 CCNE1P24864 410 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 PCSK1P29120 753 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 PPP1R2P41236 205 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 ALDH1A3P47895 512 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 FKBP3Q00688 224 aaKnown RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 LRRC63Q05C16 580 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 ENPEPQ07075 957 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 ZNF699Q32M78 642 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 MGAT5BQ3V5L5 792 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 IQCEQ6IPM2 695 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 KLHL10Q6JEL2 608 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 C2orf15Q8WU43 125 aaKnown RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 ZNF512Q96ME7 567 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 GBP4Q96PP9 640 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 MRPL45Q9BRJ2 306 aaKnown RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 C1QTNF1Q9BXJ1 281 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 MMRN2Q9H8L6 949 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 ABI2Q9NYB9 513 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 EPS15L1Q9UBC2 864 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 HSFX1Q9UBD0 423 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 MRPS23Q9Y3D9 190 aaKnown RBP16.28■□□□□ 0.2
ACTN1-217ENST00000556203 CUL9Q8IWT3 2517 aa16.28■□□□□ 0.2
ACTN1-217ENST00000556203 C2orf16Q68DN1 1984 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 PPP1R3GB7ZBB8 358 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 LAMP2P13473 410 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 LMO2P25791 158 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 GCLMP48507 274 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 TUFMP49411 452 aaKnown RBP16.27■□□□□ 0.2
ACTN1-217ENST00000556203 EPHB3P54753 998 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 PPP3CAQ08209 521 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 SLC5A9Q2M3M2 681 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 ZC3H3Q8IXZ2 948 aaKnown RBP16.27■□□□□ 0.2
ACTN1-217ENST00000556203 HS6ST3Q8IZP7 471 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 SPPL2BQ8TCT7 592 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 NELFBQ8WX92 580 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 ING5Q8WYH8 240 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 FGF13Q92913 245 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 ELMO3Q96BJ8 720 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 DNAJC25Q9H1X3 360 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 VRTNQ9H8Y1 702 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 AVENQ9NQS1 362 aaPredicted RBP16.27■□□□□ 0.2
ACTN1-217ENST00000556203 KIAA1468Q9P260 1216 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 CDH7Q9ULB5 785 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 CTNND2Q9UQB3 1225 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 PCDHB5Q9Y5E4 795 aa16.27■□□□□ 0.2
ACTN1-217ENST00000556203 NCOR1O75376 2440 aa16.27■□□□□ 0.19
ACTN1-217ENST00000556203 DENND4AQ7Z401 1863 aa16.27■□□□□ 0.19
ACTN1-217ENST00000556203 FAM86C2PA6NEL3 165 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 SLC16A3O15427 465 aaKnown RBP16.26■□□□□ 0.19
ACTN1-217ENST00000556203 TACC1O75410 805 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 PDGFRBP09619 1106 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 HAPLN1P10915 354 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-217ENST00000556203 PIK3CAP42336 1068 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 PSMC1P62191 440 aaKnown RBP16.26■□□□□ 0.19
ACTN1-217ENST00000556203 ZXDAP98168 799 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 MTMR3Q13615 1198 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 NFE2Q16621 373 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-217ENST00000556203 CCDC142Q17RM4 750 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 SGSM1Q2NKQ1 1148 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 ZNF667Q5HYK9 610 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 PRSS36Q5K4E3 855 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 CYP4A22Q5TCH4 519 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 PDZD4Q76G19 769 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-217ENST00000556203 NPAS3Q8IXF0 933 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 TRIML1Q8N9V2 468 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 OR6B3Q8NGW1 331 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 EDAQ92838 391 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 PKMYT1Q99640 499 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 LPIN3Q9BQK8 851 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 SYT15Q9BQS2 421 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 PI4K2AQ9BTU6 479 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 SNX25Q9H3E2 840 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 CLSTN2Q9H4D0 955 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 SMYD3Q9H7B4 428 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 KCNK12Q9HB15 430 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 ASAH2Q9NR71 780 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 LMBRD1Q9NUN5 540 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 GTF3C4Q9UKN8 822 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 CDH9Q9ULB4 789 aa16.26■□□□□ 0.19
ACTN1-217ENST00000556203 ZFP37Q9Y6Q3 630 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-217ENST00000556203 MYBPHLA2RUH7 354 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 ZNF197O14709 1029 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 ATP2C2O75185 946 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 HLA-DRAP01903 254 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 FAM163BP0C2L3 166 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 MYL4P12829 197 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 ATF6P18850 670 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 GTF2H1P32780 548 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 GNL1P36915 607 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-217ENST00000556203 FAM171BQ6P995 826 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 SCARA5Q6ZMJ2 495 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 LEMD2Q8NC56 503 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 ST13P5Q8NFI4 369 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-217ENST00000556203 FAM200AQ8TCP9 573 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 TCEAL4Q96EI5 215 aa16.25■□□□□ 0.19
ACTN1-217ENST00000556203 SMOC2Q9H3U7 446 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms