RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 NAALADL1Q9UQQ1 740 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 NEU2Q9Y3R4 380 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 RIPK3Q9Y572 518 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 CEP83Q9Y592 693 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 GJA3Q9Y6H8 435 aa7.4□□□□□ -1.23
TDP1-213ENST00000555880 A0A0B4J269 797 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 DNALI1O14645 258 aaPredicted RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 LIASO43766 372 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 UBOX5O94941 541 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 GJB6O95452 261 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 ATP6V1G2O95670 118 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 HARSP12081 509 aaKnown RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 MMP8P22894 467 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 KLRC2P26717 231 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 ARSEP51690 589 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 PLCB3Q01970 1234 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 PDE4CQ08493 712 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 GPS1Q13098 491 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 RIPK1Q13546 671 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 MORF4L2Q15014 288 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 STXBP2Q15833 593 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 KAZNQ674X7 775 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 DRICH1Q6PGQ1 229 aaPredicted RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 TBC1D1Q86TI0 1168 aaPredicted RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 SCYL3Q8IZE3 742 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 TMEM35BQ8NCS4 154 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 FBF1Q8TES7 1133 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 KCNN1Q92952 543 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 WNK4Q96J92 1243 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 SLITRK1Q96PX8 696 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 PAIP2Q9BPZ3 127 aaKnown RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 RXFP1Q9HBX9 757 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 APOBEC3GQ9HC16 384 aaKnown RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 NOD2Q9HC29 1040 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 CYP39A1Q9NYL5 469 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 BAIAP2L1Q9UHR4 511 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 SCAF8Q9UPN6 1271 aaKnown RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 SMG5Q9UPR3 1016 aaKnown RBP7.39□□□□□ -1.23
TDP1-213ENST00000555880 CNTN6Q9UQ52 1028 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 PTPRJQ12913 1337 aa7.39□□□□□ -1.23
TDP1-213ENST00000555880 PI4K2BG5E9Z4 385 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 RGS20O76081 388 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GH1P01241 217 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 CFHP08603 1231 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 CREB1P16220 341 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 KRT15P19012 456 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GLRA2P23416 452 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GBP2P32456 591 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 SSTR3P32745 418 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 PTPN7P35236 360 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 EFNA5P52803 228 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 HMGCS2P54868 508 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GSCP56915 257 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZNF280AP59817 542 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 YWHAEP62258 255 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 IRX3P78415 501 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 PIGHQ14442 188 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 SETDB1Q15047 1291 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 MTFR1Q15390 333 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TFDP3Q5H9I0 405 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 WLSQ5T9L3 541 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 FAM160B1Q5W0V3 765 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 CRELD2Q6UXH1 353 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 SPOCD1Q6ZMY3 1216 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 CENPUQ71F23 418 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 WDR49Q8IV35 697 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ALLCQ8N6M5 410 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ASAP3Q8TDY4 903 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZNF606Q8WXB4 792 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 KLHL29Q96CT2 875 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 MCEEQ96PE7 176 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 SMC6Q96SB8 1091 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TCHPQ9BT92 498 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TARS2Q9BW92 718 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 PITPNM3Q9BZ71 974 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ZNF518BQ9C0D4 1074 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 DHX33Q9H6R0 707 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 TMEM134Q9H6X4 195 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 VPS37BQ9H9H4 285 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 NRBP2Q9NSY0 501 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TXLNGQ9NUQ3 528 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 KLHL11Q9NVR0 708 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 GEMIN8Q9NWZ8 242 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 FBXO40Q9UH90 709 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 STRIP2Q9ULQ0 834 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 SHOC2Q9UQ13 582 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 DRG1Q9Y295 367 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 NUB1Q9Y5A7 615 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 MAFBQ9Y5Q3 323 aaPredicted RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 RLFQ13129 1914 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 LRRD1A4D1F6 860 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TMEM191CA6NGB0 347 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 C19orf81C9J6K1 198 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 SGK1O00141 431 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 NFKBIEO00221 500 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 ASS1P00966 412 aaKnown RBP7.38□□□□□ -1.23
TDP1-213ENST00000555880 ITGAVP06756 1048 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 TMEM191BP0C7N4 346 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 KRT10P13645 584 aa7.38□□□□□ -1.23
TDP1-213ENST00000555880 NQO1P15559 274 aaKnown RBP7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms