RNA–Protein interactions for RNA: ENST00000555822.5

CCDC85C-204, Transcript of coiled-coil domain containing 85C, humanhuman

TSL 5 BASIC

Gene CCDC85C, Length 930 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC85C-204ENST00000555822 USP37Q86T82 979 aa17.32■□□□□ 0.36
CCDC85C-204ENST00000555822 CGRRF1Q99675 332 aa17.32■□□□□ 0.36
CCDC85C-204ENST00000555822 TSG101Q99816 390 aa17.32■□□□□ 0.36
CCDC85C-204ENST00000555822 INTS13Q9NVM9 706 aa17.32■□□□□ 0.36
CCDC85C-204ENST00000555822 FRMD4BQ9Y2L6 1034 aa17.32■□□□□ 0.36
CCDC85C-204ENST00000555822 PTPRJQ12913 1337 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 PPP1R3GB7ZBB8 358 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 BIN1O00499 593 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 CCL16O15467 120 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 OAZ2O95190 189 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 TMEM191BP0C7N4 346 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 CD44P16070 742 aaKnown RBP17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 CCNE1P24864 410 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 CASP4P49662 377 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 LILRA4P59901 499 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 ENPEPQ07075 957 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 ADAM9Q13443 819 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 DUOXA2Q1HG44 320 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 ZC3H3Q8IXZ2 948 aaKnown RBP17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 C1orf127Q8N9H9 656 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 ANKRD36BP1Q96IX9 119 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 FNBP1Q96RU3 617 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 RPP25Q9BUL9 199 aaKnown RBP17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 FOXQ1Q9C009 403 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 GZF1Q9H116 711 aaPredicted RBP17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.31■□□□□ 0.361e-6■■■□□ 18.9
CCDC85C-204ENST00000555822 EPS15L1Q9UBC2 864 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 AFF4Q9UHB7 1163 aaKnown RBP17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 ITGA11Q9UKX5 1188 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 MAFFQ9ULX9 164 aa17.31■□□□□ 0.36
CCDC85C-204ENST00000555822 TNNC2P02585 160 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 SRFP11831 508 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 ODC1P11926 461 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 ATF2P15336 505 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 FSHRP23945 695 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 TAF6P49848 677 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 CLDN10P78369 228 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 CEP135Q66GS9 1140 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 GET4Q7L5D6 327 aaPredicted RBP17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 GRASPQ7Z6J2 395 aaPredicted RBP17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 TCEAL8Q8IYN2 117 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 CXorf38Q8TB03 319 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 TMC2Q8TDI7 906 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 PARD3BQ8TEW8 1205 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 RUBCNQ92622 972 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 SENP8Q96LD8 212 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 ZNF560Q96MR9 790 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 MKNK1Q9BUB5 465 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 MTMR12Q9C0I1 747 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 CYP4F11Q9HBI6 524 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 POLIQ9UNA4 740 aa17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 TIMM13Q9Y5L4 95 aaPredicted RBP17.3■□□□□ 0.36
CCDC85C-204ENST00000555822 CHD6Q8TD26 2715 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 OR6C75A6NL08 312 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 PRRG1O14668 218 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 CETN3O15182 167 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 AKAP3O75969 853 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 LRG1P02750 347 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 ITGB3P05106 788 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 DLATP10515 647 aaKnown RBP17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 CPB1P15086 417 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 TNNI1P19237 187 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 PSMC2P35998 433 aaKnown RBP17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 PNPLA4P41247 253 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 AP3M2P53677 418 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 PMS1P54277 932 aaKnown RBP17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 MCCD1P59942 119 aaPredicted RBP17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 FKBP3Q00688 224 aaKnown RBP17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 ANKRD40Q6AI12 368 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 OVOS1Q6IE37 1185 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 PHLDB3Q6NSJ2 640 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 C1orf210Q8IVY1 113 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 LRRC52Q8N7C0 313 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 OR5B17Q8NGF7 314 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 PLEKHO2Q8TD55 490 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 NXPE3Q969Y0 559 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 CCDC127Q96BQ5 260 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 ZFP37Q9Y6Q3 630 aaPredicted RBP17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 USP24Q9UPU5 2620 aa17.29■□□□□ 0.36
CCDC85C-204ENST00000555822 BICDL2A1A5D9 508 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 SPTLC1O15269 473 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 POLR2BP30876 1174 aaKnown RBP17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 NTHL1P78549 312 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 RBP5P82980 135 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 SV2CQ496J9 727 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 RBM43Q6ZSC3 357 aaKnown RBP17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 INTS8Q75QN2 995 aaKnown RBP17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 FAM186BQ8IYM0 893 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 HINFPQ9BQA5 517 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 SIX4Q9UIU6 781 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 DSEQ9UL01 958 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 SIT1Q9Y3P8 196 aa17.28■□□□□ 0.36
CCDC85C-204ENST00000555822 TRIM49BA6NDI0 452 aa17.27■□□□□ 0.36
CCDC85C-204ENST00000555822 LRRIQ3A6PVS8 624 aaPredicted RBP17.27■□□□□ 0.36
CCDC85C-204ENST00000555822 ANHXE9PGG2 379 aa17.27■□□□□ 0.36
CCDC85C-204ENST00000555822 IKBKBO14920 756 aa17.27■□□□□ 0.36
CCDC85C-204ENST00000555822 SLC16A3O15427 465 aaKnown RBP17.27■□□□□ 0.36
CCDC85C-204ENST00000555822 SEC24AO95486 1093 aa17.27■□□□□ 0.36
CCDC85C-204ENST00000555822 CYP11A1P05108 521 aa17.27■□□□□ 0.36
CCDC85C-204ENST00000555822 LAMP2P13473 410 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms