RNA–Protein interactions for RNA: ENST00000554994.5

ATXN3-231, Transcript of ataxin 3, human

TSL 1 (best)

Gene ATXN3, Length 922 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATXN3-231	ENST00000554994	TNKS2	Q9H2K2	1166 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	FOXP1	Q9H334	677 aa	Predicted RBP	5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	POMK	Q9H5K3	350 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	TLE6	Q9H808	572 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	RGL1	Q9NZL6	768 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	TUBE1	Q9UJT0	475 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	AKT3	Q9Y243	479 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	NR2E1	Q9Y466	385 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	SNX11	Q9Y5W9	270 aa		5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	SMG1	Q96Q15	3661 aa	Known RBP	5.18	□□□□□ -1.58
ATXN3-231	ENST00000554994	ANK1	P16157	1881 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	DSP	P15924	2871 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	TMEM150B	A6NC51	233 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	TCAF2	A6NFQ2	919 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	ZNF862	O60290	1169 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	DKC1	O60832	514 aa	Known RBP eCLIP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	PSMD10	O75832	226 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	VTN	P04004	478 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	ITGB1	P05556	798 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	RB1	P06400	928 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	P4HB	P07237	508 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	SRGAP2C	P0DJJ0	459 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	TMOD1	P28289	359 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	CCT6A	P40227	531 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	QARS	P47897	775 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	DNM2	P50570	870 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	PSMC5	P62195	406 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	EPHA7	Q15375	998 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	UGCG	Q16739	394 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	PPP4R3A	Q6IN85	833 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	SYCE2	Q6PIF2	218 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	MOXD1	Q6UVY6	613 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	DTHD1	Q6ZMT9	781 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	SERINC5	Q86VE9	423 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	LRRC71	Q8N4P6	559 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	TDRD5	Q8NAT2	981 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	RASSF8	Q8NHQ8	419 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	ERMN	Q8TAM6	284 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	ATP8B4	Q8TF62	1192 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	POF1B	Q8WVV4	589 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	ZCCHC14	Q8WYQ9	949 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	HAS1	Q92839	578 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	SECISBP2L	Q93073	1101 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	TOP1MT	Q969P6	601 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	LENG9	Q96B70	501 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	FAM167A	Q96KS9	214 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	CEP170P1	Q96L14	293 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	HEXIM2	Q96MH2	286 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	BBC3	Q96PG8	261 aa	Predicted RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	PLIN2	Q99541	437 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	EIF2AK1	Q9BQI3	630 aa	Known RBP	5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	OSBPL7	Q9BZF2	842 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	S1PR5	Q9H228	398 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	TMEM60	Q9H2L4	133 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	PCDHB6	Q9Y5E3	794 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	CDY2A	Q9Y6F7	541 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	KIAA1671	Q9BY89	1806 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	TTC3	P53804	2025 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	FANCM	Q8IYD8	2048 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	EMSY	Q7Z589	1322 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	NBEA	Q8NFP9	2946 aa		5.17	□□□□□ -1.58
ATXN3-231	ENST00000554994	MYO18B	Q8IUG5	2567 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	VWA3A	A6NCI4	1184 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	TBX3	O15119	743 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	MAGEB2	O15479	319 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	NARS	O43776	548 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	LRRN2	O75325	713 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	TOP3B	O95985	862 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	CHRNA1	P02708	482 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	SSB	P05455	408 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	OR52Z1	P0C646	297 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	GHR	P10912	638 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	HOXA5	P20719	270 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	SYT1	P21579	422 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	U2AF2	P26368	475 aa	Known RBP eCLIP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	SLC26A2	P50443	739 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	CLCN3	P51790	818 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	POLG	P54098	1239 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	NPEPPS	P55786	919 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	NLRP11	P59045	1033 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	MRPS6	P82932	125 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	PRKCE	Q02156	737 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	BECN1	Q14457	450 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	DHX8	Q14562	1220 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	SF3A1	Q15459	793 aa	Known RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	KIZ	Q2M2Z5	673 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	XKR3	Q5GH77	459 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	MARCH8	Q5T0T0	291 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	PLA2G4F	Q68DD2	849 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	ANKRD54	Q6NXT1	300 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	FAM173B	Q6P4H8	233 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	PDZD3	Q86UT5	571 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	SESTD1	Q86VW0	696 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	RHPN2	Q8IUC4	686 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	C1orf210	Q8IVY1	113 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	GALNT12	Q8IXK2	581 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	MAML2	Q8IZL2	1156 aa	Predicted RBP	5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	NME8	Q8N427	588 aa		5.16	□□□□□ -1.58
ATXN3-231	ENST00000554994	ETNPPL	Q8TBG4	499 aa		5.16	□□□□□ -1.58

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