RNA–Protein interactions for RNA: ENST00000554952.5

PSMC6-207, Transcript of proteasome 26S subunit, ATPase 6, humanhuman

TSL 1 (best)

Gene PSMC6, Length 1,037 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMC6-207ENST00000554952 LTB4R2Q9NPC1 389 aa12.79□□□□□ -0.36
PSMC6-207ENST00000554952 SPATA6Q9NWH7 488 aaPredicted RBP12.79□□□□□ -0.36
PSMC6-207ENST00000554952 HSFX1Q9UBD0 423 aa12.79□□□□□ -0.36
PSMC6-207ENST00000554952 R3HCC1Q9Y3T6 440 aaKnown RBP12.79□□□□□ -0.36
PSMC6-207ENST00000554952 TCHHQ07283 1943 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 COL4A3Q01955 1670 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 ZNF233A6NK53 670 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 HEPACAM2A8MVW5 462 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 ZNF263O14978 683 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 NCAM2O15394 837 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 POLR2DO15514 142 aaKnown RBP12.78□□□□□ -0.36
PSMC6-207ENST00000554952 HUS1O60921 280 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 SP9P0CG40 484 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 GABRR2P28476 465 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 ME1P48163 572 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 RBP5P82980 135 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 SMARCB1Q12824 385 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 BFSP1Q12934 665 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 VEPH1Q14D04 833 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 STXBP5Q5T5C0 1151 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 SCARA3Q6AZY7 606 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 GAREM2Q75VX8 874 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 ARID3BQ8IVW6 561 aaPredicted RBP12.78□□□□□ -0.36
PSMC6-207ENST00000554952 MFSD6LQ8IWD5 586 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 YAF2Q8IY57 180 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 PDCL2Q8N4E4 241 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 DNASE1L2Q92874 299 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 E2F7Q96AV8 911 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 TRPV4Q9HBA0 871 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 ZNF334Q9HCZ1 680 aaPredicted RBP12.78□□□□□ -0.36
PSMC6-207ENST00000554952 ABI2Q9NYB9 513 aaPredicted RBP12.78□□□□□ -0.36
PSMC6-207ENST00000554952 FAM13BQ9NYF5 915 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.78□□□□□ -0.36
PSMC6-207ENST00000554952 PCDHA7Q9UN72 937 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 MRPS17Q9Y2R5 130 aaKnown RBP12.78□□□□□ -0.36
PSMC6-207ENST00000554952 R4GN57 208 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 WDR87Q6ZQQ6 2873 aa12.78□□□□□ -0.36
PSMC6-207ENST00000554952 MAN2B1O00754 1011 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 DPYSL4O14531 572 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 SNPHO15079 494 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 KIAA0391O15091 583 aaKnown RBP12.77□□□□□ -0.37
PSMC6-207ENST00000554952 FGF19O95750 216 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 TMEM191BP0C7N4 346 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 HAPLN1P10915 354 aaPredicted RBP12.77□□□□□ -0.37
PSMC6-207ENST00000554952 TARSP26639 723 aaKnown RBP12.77□□□□□ -0.37
PSMC6-207ENST00000554952 HOXD13P35453 343 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 TSPY1Q01534 308 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 ARHGAP15Q53QZ3 475 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 GPR158Q5T848 1215 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 LMBRD2Q68DH5 695 aaPredicted RBP12.77□□□□□ -0.37
PSMC6-207ENST00000554952 CBWD2Q8IUF1 395 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 RDH13Q8NBN7 331 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 ZNF507Q8TCN5 953 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 SPPL2BQ8TCT7 592 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 C2orf15Q8WU43 125 aaKnown RBP12.77□□□□□ -0.37
PSMC6-207ENST00000554952 DEPDC1BQ8WUY9 529 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 RSPRY1Q96DX4 576 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 C7orf25Q9BPX7 421 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 PI4K2AQ9BTU6 479 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 MTMR12Q9C0I1 747 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 BLZF1Q9H2G9 400 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 TMLHEQ9NVH6 421 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 DDX43Q9NXZ2 648 aaKnown RBP12.77□□□□□ -0.37
PSMC6-207ENST00000554952 HSPBP1Q9NZL4 362 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 ITGA11Q9UKX5 1188 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 CFAP45Q9UL16 551 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 NDRG2Q9UN36 371 aaKnown RBP12.77□□□□□ -0.37
PSMC6-207ENST00000554952 L1RE1Q9UN81 338 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 PCDHB5Q9Y5E4 795 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 SNX9Q9Y5X1 595 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 GPR179Q6PRD1 2367 aa12.77□□□□□ -0.37
PSMC6-207ENST00000554952 MIA3Q5JRA6 1907 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 LAMTOR5O43504 91 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 PRPF40AO75400 957 aaKnown RBP12.76□□□□□ -0.37
PSMC6-207ENST00000554952 TNNC2P02585 160 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 ATF6P18850 670 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 ACAT1P24752 427 aaKnown RBP12.76□□□□□ -0.37
PSMC6-207ENST00000554952 CASP1P29466 404 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 AFMP43652 599 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 MYL7Q01449 175 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 DNM1Q05193 864 aaKnown RBP12.76□□□□□ -0.37
PSMC6-207ENST00000554952 MMRN1Q13201 1228 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 PKP1Q13835 747 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 DUOXA2Q1HG44 320 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 FAM26FQ5R3K3 315 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 ATL3Q6DD88 541 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 ADSSL1Q8N142 457 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 LRRC52Q8N7C0 313 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 CXorf38Q8TB03 319 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 CLDN23Q96B33 292 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 ANKRD36BP1Q96IX9 119 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 ACBD6Q9BR61 282 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 TRPV5Q9NQA5 729 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 SIX4Q9UIU6 781 aa12.76□□□□□ -0.37
PSMC6-207ENST00000554952 USP34Q70CQ2 3546 aa12.75□□□□□ -0.37
PSMC6-207ENST00000554952 SHISA7A6NL88 538 aa12.75□□□□□ -0.37
PSMC6-207ENST00000554952 CLIC2O15247 247 aa12.75□□□□□ -0.37
PSMC6-207ENST00000554952 EIF3DO15371 548 aaKnown RBP eCLIP12.75□□□□□ -0.37
PSMC6-207ENST00000554952 CDC25CP30307 473 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms