RNA–Protein interactions for RNA: ENST00000554879.5

PCNX1-209, Transcript of pecanex 1, humanhuman

TSL 1 (best)

Gene PCNX1, Length 4,431 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX1-209ENST00000554879 MS4A4AQ96JQ5 239 aa17.49■□□□□ 0.39
PCNX1-209ENST00000554879 MCEEQ96PE7 176 aa17.49■□□□□ 0.39
PCNX1-209ENST00000554879 GBP5Q96PP8 586 aa17.49■□□□□ 0.39
PCNX1-209ENST00000554879 PTPN18Q99952 460 aa17.49■□□□□ 0.39
PCNX1-209ENST00000554879 FAM118BQ9BPY3 351 aa17.49■□□□□ 0.39
PCNX1-209ENST00000554879 UMODL1Q5DID0 1318 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 ZC3H11AO75152 810 aaKnown RBP eCLIP17.48■□□□□ 0.39
PCNX1-209ENST00000554879 GAS8O95995 478 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 ADCY8P40145 1251 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 SHC3Q92529 594 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 PJA2O43164 708 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 ATG7O95352 703 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 LONP2Q86WA8 852 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 FBXL5Q9UKA1 691 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 PPME1Q9Y570 386 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 CAPN9O14815 690 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 MAPK13O15264 365 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 FAM102AQ5T9C2 384 aaPredicted RBP17.48■□□□□ 0.39
PCNX1-209ENST00000554879 HOOK3Q86VS8 718 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 FAXDC2Q96IV6 333 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 FAM210AQ96ND0 272 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 FAM193BQ96PV7 902 aaPredicted RBP17.48■□□□□ 0.39
PCNX1-209ENST00000554879 VCXQ9H320 206 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 SNX24Q9Y343 169 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 SSC5DA1L4H1 1573 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 SART1O43290 800 aaKnown RBP17.48■□□□□ 0.39
PCNX1-209ENST00000554879 CALB1P05937 261 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 FECHP22830 423 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 DR1Q01658 176 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 KRT81Q14533 505 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 TRIM72Q6ZMU5 477 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 FAM71AQ8IYT1 594 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 KLHL23Q8NBE8 558 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 C1orf54Q8WWF1 131 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 LBHD1Q9BQE6 289 aaPredicted RBP17.48■□□□□ 0.39
PCNX1-209ENST00000554879 GTF3C4Q9UKN8 822 aa17.48■□□□□ 0.39
PCNX1-209ENST00000554879 PECAM1P16284 738 aaPredicted RBP17.47■□□□□ 0.39
PCNX1-209ENST00000554879 CTCFP49711 727 aaPredicted RBP17.47■□□□□ 0.39
PCNX1-209ENST00000554879 PAPOLAP51003 745 aaKnown RBP17.47■□□□□ 0.39
PCNX1-209ENST00000554879 SNX16P57768 344 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 CCDC62Q6P9F0 684 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 TAS1R3Q7RTX0 852 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 ZNF606Q8WXB4 792 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 HSPH1Q92598 858 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 ACSF2Q96CM8 615 aaPredicted RBP17.47■□□□□ 0.39
PCNX1-209ENST00000554879 APBA2Q99767 749 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 DNAJC17Q9NVM6 304 aaKnown RBP17.47■□□□□ 0.39
PCNX1-209ENST00000554879 INTUQ9ULD6 942 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 KLHL33A6NCF5 533 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 ANP32DO95626 131 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 IFNAR2P48551 515 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 LLGL2Q6P1M3 1020 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 ABRAQ8N0Z2 381 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 NOD2Q9HC29 1040 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 XPNPEP3Q9NQH7 507 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 BATF3Q9NR55 127 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 GPR25O00155 361 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 LSP1P33241 339 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 CDC42EP1Q00587 391 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 CUL3Q13618 768 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 MEI1Q5TIA1 1274 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 IFNL1Q8IU54 200 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 ABI1Q8IZP0 508 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 MAF1Q9H063 256 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 UVRAGQ9P2Y5 699 aa17.47■□□□□ 0.39
PCNX1-209ENST00000554879 DMGDHQ9UI17 866 aaKnown RBP17.47■□□□□ 0.39
PCNX1-209ENST00000554879 TREHO43280 583 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 LUC7L3O95232 432 aaKnown RBP17.46■□□□□ 0.39
PCNX1-209ENST00000554879 C22orf31O95567 290 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 PAN2Q504Q3 1202 aaKnown RBP17.46■□□□□ 0.39
PCNX1-209ENST00000554879 TMEM192Q8IY95 271 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 ARL8AQ96BM9 186 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 CELF4Q9BZC1 486 aaKnown RBP17.46■□□□□ 0.39
PCNX1-209ENST00000554879 TNFSF13BQ9Y275 285 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 MCF2P10911 925 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 MUM1Q2TAK8 710 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 C18orf8Q96DM3 657 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 PARVAQ9NVD7 372 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 NRCAMQ92823 1304 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 H0Y3Z8 333 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 EIF4BP23588 611 aaKnown RBP17.46■□□□□ 0.39
PCNX1-209ENST00000554879 ACCSLQ4AC99 568 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 CAPN12Q6ZSI9 719 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 DDX42Q86XP3 938 aaKnown RBP eCLIP17.46■□□□□ 0.39
PCNX1-209ENST00000554879 PAF1Q8N7H5 531 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 ZNF516Q92618 1163 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 LRRC45Q96CN5 670 aa17.46■□□□□ 0.39
PCNX1-209ENST00000554879 FANCGO15287 622 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 KRT3P12035 628 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 GZMAP12544 262 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 RPS6KA3P51812 740 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 KRT71Q3SY84 523 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 CST9Q5W186 159 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 ACOT1Q86TX2 421 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 HELQQ8TDG4 1101 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 BORCS6Q96GS4 357 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 PCDHB18PQ96TA0 734 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 ATP8A1Q9Y2Q0 1164 aa17.46■□□□□ 0.38
PCNX1-209ENST00000554879 MSCO60682 206 aa17.45■□□□□ 0.38
PCNX1-209ENST00000554879 CTNNA1P35221 906 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms